Protein–RNA interactions for Protein: Q86UQ8

NFE4, Transcription factor NF-E4, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4Q86UQ8 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NFE4Q86UQ8 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NFE4Q86UQ8 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC15.69■□□□□ 0.1
NFE4Q86UQ8 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NFE4Q86UQ8 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC15.69■□□□□ 0.1
NFE4Q86UQ8 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
NFE4Q86UQ8 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC15.69■□□□□ 0.1
NFE4Q86UQ8 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NFE4Q86UQ8 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC15.69■□□□□ 0.1
NFE4Q86UQ8 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NFE4Q86UQ8 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
NFE4Q86UQ8 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NFE4Q86UQ8 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NFE4Q86UQ8 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC15.69■□□□□ 0.1
NFE4Q86UQ8 AC092667.1-201ENST00000434301 2586 ntBASIC15.69■□□□□ 0.1
NFE4Q86UQ8 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NFE4Q86UQ8 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NFE4Q86UQ8 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NFE4Q86UQ8 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NFE4Q86UQ8 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NFE4Q86UQ8 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NFE4Q86UQ8 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC15.68■□□□□ 0.1
NFE4Q86UQ8 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC15.68■□□□□ 0.1
NFE4Q86UQ8 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NFE4Q86UQ8 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NFE4Q86UQ8 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NFE4Q86UQ8 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC15.68■□□□□ 0.1
NFE4Q86UQ8 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
NFE4Q86UQ8 TSPY9P-201ENST00000440215 945 ntBASIC15.68■□□□□ 0.1
NFE4Q86UQ8 TSPY11P-201ENST00000442607 1045 ntBASIC15.68■□□□□ 0.1
NFE4Q86UQ8 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NFE4Q86UQ8 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NFE4Q86UQ8 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NFE4Q86UQ8 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
NFE4Q86UQ8 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NFE4Q86UQ8 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NFE4Q86UQ8 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC15.67■□□□□ 0.1
NFE4Q86UQ8 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NFE4Q86UQ8 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC15.67■□□□□ 0.1
NFE4Q86UQ8 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
NFE4Q86UQ8 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC15.67■□□□□ 0.1
NFE4Q86UQ8 TK2-202ENST00000417693 1046 ntTSL 2 BASIC15.67■□□□□ 0.1
NFE4Q86UQ8 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC15.67■□□□□ 0.1
NFE4Q86UQ8 MTDHP2-201ENST00000601468 714 ntBASIC15.67■□□□□ 0.1
NFE4Q86UQ8 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NFE4Q86UQ8 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC15.67■□□□□ 0.1
NFE4Q86UQ8 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NFE4Q86UQ8 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC15.67■□□□□ 0.1
NFE4Q86UQ8 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NFE4Q86UQ8 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NFE4Q86UQ8 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC15.66■□□□□ 0.1
NFE4Q86UQ8 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
NFE4Q86UQ8 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NFE4Q86UQ8 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
NFE4Q86UQ8 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
NFE4Q86UQ8 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC15.66■□□□□ 0.1
NFE4Q86UQ8 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
NFE4Q86UQ8 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NFE4Q86UQ8 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC15.66■□□□□ 0.1
NFE4Q86UQ8 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NFE4Q86UQ8 LSM7-203ENST00000585409 512 ntTSL 2 BASIC15.66■□□□□ 0.1
NFE4Q86UQ8 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC15.66■□□□□ 0.1
NFE4Q86UQ8 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NFE4Q86UQ8 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC15.66■□□□□ 0.1
NFE4Q86UQ8 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
NFE4Q86UQ8 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
NFE4Q86UQ8 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NFE4Q86UQ8 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
NFE4Q86UQ8 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NFE4Q86UQ8 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NFE4Q86UQ8 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC15.66■□□□□ 0.1
NFE4Q86UQ8 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NFE4Q86UQ8 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
NFE4Q86UQ8 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
NFE4Q86UQ8 AL137060.1-201ENST00000618151 2648 ntBASIC15.65■□□□□ 0.1
NFE4Q86UQ8 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NFE4Q86UQ8 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NFE4Q86UQ8 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NFE4Q86UQ8 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NFE4Q86UQ8 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NFE4Q86UQ8 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NFE4Q86UQ8 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC15.65■□□□□ 0.1
NFE4Q86UQ8 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NFE4Q86UQ8 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
NFE4Q86UQ8 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC15.65■□□□□ 0.1
NFE4Q86UQ8 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
NFE4Q86UQ8 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NFE4Q86UQ8 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NFE4Q86UQ8 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
NFE4Q86UQ8 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
NFE4Q86UQ8 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC15.64■□□□□ 0.1
NFE4Q86UQ8 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NFE4Q86UQ8 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NFE4Q86UQ8 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC15.64■□□□□ 0.09
NFE4Q86UQ8 BID-212ENST00000614949 1988 ntTSL 5 BASIC15.64■□□□□ 0.09
NFE4Q86UQ8 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
NFE4Q86UQ8 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
NFE4Q86UQ8 UNC93B8-201ENST00000511903 705 ntBASIC15.64■□□□□ 0.09
NFE4Q86UQ8 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
NFE4Q86UQ8 CD37-213ENST00000598095 1598 ntTSL 2 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms