Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.62■□□□□ 0.57
VPS13CQ709C8 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VPS13CQ709C8 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
VPS13CQ709C8 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VPS13CQ709C8 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
VPS13CQ709C8 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC18.61■□□□□ 0.57
VPS13CQ709C8 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.61■□□□□ 0.57
VPS13CQ709C8 AC006970.2-201ENST00000450065 779 ntBASIC18.61■□□□□ 0.57
VPS13CQ709C8 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.61■□□□□ 0.57
VPS13CQ709C8 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.61■□□□□ 0.57
VPS13CQ709C8 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
VPS13CQ709C8 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
VPS13CQ709C8 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.61■□□□□ 0.57
VPS13CQ709C8 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.61■□□□□ 0.57
VPS13CQ709C8 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
VPS13CQ709C8 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
VPS13CQ709C8 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
VPS13CQ709C8 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.61■□□□□ 0.57
VPS13CQ709C8 AC010525.1-201ENST00000585559 441 ntBASIC18.61■□□□□ 0.57
VPS13CQ709C8 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
VPS13CQ709C8 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
VPS13CQ709C8 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
VPS13CQ709C8 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
VPS13CQ709C8 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.61■□□□□ 0.57
VPS13CQ709C8 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.61■□□□□ 0.57
VPS13CQ709C8 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
VPS13CQ709C8 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VPS13CQ709C8 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC18.61■□□□□ 0.57
VPS13CQ709C8 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.61■□□□□ 0.57
VPS13CQ709C8 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
VPS13CQ709C8 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VPS13CQ709C8 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC18.6■□□□□ 0.57
VPS13CQ709C8 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
VPS13CQ709C8 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
VPS13CQ709C8 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
VPS13CQ709C8 AC098590.1-201ENST00000468126 897 ntBASIC18.6■□□□□ 0.57
VPS13CQ709C8 ALDH1A3-203ENST00000557963 1670 ntBASIC18.6■□□□□ 0.57
VPS13CQ709C8 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.6■□□□□ 0.57
VPS13CQ709C8 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
VPS13CQ709C8 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
VPS13CQ709C8 AC069152.1-201ENST00000438030 544 ntBASIC18.6■□□□□ 0.57
VPS13CQ709C8 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VPS13CQ709C8 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
VPS13CQ709C8 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.59■□□□□ 0.57
VPS13CQ709C8 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
VPS13CQ709C8 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.59■□□□□ 0.57
VPS13CQ709C8 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
VPS13CQ709C8 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VPS13CQ709C8 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.59■□□□□ 0.57
VPS13CQ709C8 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
VPS13CQ709C8 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
VPS13CQ709C8 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VPS13CQ709C8 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VPS13CQ709C8 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC18.59■□□□□ 0.57
VPS13CQ709C8 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC18.59■□□□□ 0.57
VPS13CQ709C8 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
VPS13CQ709C8 AC144652.1-201ENST00000609974 1624 ntBASIC18.59■□□□□ 0.57
VPS13CQ709C8 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VPS13CQ709C8 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.59■□□□□ 0.57
VPS13CQ709C8 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.59■□□□□ 0.57
VPS13CQ709C8 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VPS13CQ709C8 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
VPS13CQ709C8 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
VPS13CQ709C8 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
VPS13CQ709C8 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.58■□□□□ 0.57
VPS13CQ709C8 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.57
VPS13CQ709C8 CD99P1-205ENST00000527459 561 ntBASIC18.58■□□□□ 0.57
VPS13CQ709C8 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.58■□□□□ 0.57
VPS13CQ709C8 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.58■□□□□ 0.57
VPS13CQ709C8 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.57
VPS13CQ709C8 GPX1P1-201ENST00000388829 606 ntBASIC18.58■□□□□ 0.56
VPS13CQ709C8 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.58■□□□□ 0.56
VPS13CQ709C8 OR2I1P-207ENST00000453522 948 ntBASIC18.58■□□□□ 0.56
VPS13CQ709C8 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.58■□□□□ 0.56
VPS13CQ709C8 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
VPS13CQ709C8 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.58■□□□□ 0.56
VPS13CQ709C8 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC18.58■□□□□ 0.56
VPS13CQ709C8 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.58■□□□□ 0.56
VPS13CQ709C8 AC093827.2-201ENST00000512654 315 ntBASIC18.58■□□□□ 0.56
VPS13CQ709C8 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.58■□□□□ 0.56
VPS13CQ709C8 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VPS13CQ709C8 BX005040.4-201ENST00000637145 1518 ntBASIC18.57■□□□□ 0.56
VPS13CQ709C8 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.57■□□□□ 0.56
VPS13CQ709C8 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.57■□□□□ 0.56
VPS13CQ709C8 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.57■□□□□ 0.56
VPS13CQ709C8 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
VPS13CQ709C8 SHD-204ENST00000599689 1729 ntTSL 5 BASIC18.57■□□□□ 0.56
VPS13CQ709C8 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.57■□□□□ 0.56
VPS13CQ709C8 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VPS13CQ709C8 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VPS13CQ709C8 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VPS13CQ709C8 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
VPS13CQ709C8 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
VPS13CQ709C8 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
VPS13CQ709C8 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.56■□□□□ 0.56
VPS13CQ709C8 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VPS13CQ709C8 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VPS13CQ709C8 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
VPS13CQ709C8 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
VPS13CQ709C8 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms