Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
COLCA1Q6ZS62 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COLCA1Q6ZS62 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COLCA1Q6ZS62 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COLCA1Q6ZS62 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COLCA1Q6ZS62 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.05■□□□□ 0.64
COLCA1Q6ZS62 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COLCA1Q6ZS62 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
COLCA1Q6ZS62 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COLCA1Q6ZS62 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COLCA1Q6ZS62 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
COLCA1Q6ZS62 AL117328.2-201ENST00000624617 1940 ntBASIC19.04■□□□□ 0.64
COLCA1Q6ZS62 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
COLCA1Q6ZS62 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COLCA1Q6ZS62 DUX4L19-201ENST00000557448 1267 ntBASIC19.04■□□□□ 0.64
COLCA1Q6ZS62 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
COLCA1Q6ZS62 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
COLCA1Q6ZS62 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
COLCA1Q6ZS62 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.04■□□□□ 0.64
COLCA1Q6ZS62 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.04■□□□□ 0.64
COLCA1Q6ZS62 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
COLCA1Q6ZS62 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COLCA1Q6ZS62 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COLCA1Q6ZS62 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COLCA1Q6ZS62 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COLCA1Q6ZS62 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COLCA1Q6ZS62 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.03■□□□□ 0.64
COLCA1Q6ZS62 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
COLCA1Q6ZS62 AL138724.1-201ENST00000606771 1088 ntBASIC19.03■□□□□ 0.64
COLCA1Q6ZS62 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.03■□□□□ 0.64
COLCA1Q6ZS62 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.03■□□□□ 0.64
COLCA1Q6ZS62 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COLCA1Q6ZS62 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COLCA1Q6ZS62 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COLCA1Q6ZS62 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
COLCA1Q6ZS62 LINC01960-201ENST00000563759 1884 ntBASIC19.03■□□□□ 0.64
COLCA1Q6ZS62 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.02■□□□□ 0.64
COLCA1Q6ZS62 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
COLCA1Q6ZS62 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.02■□□□□ 0.64
COLCA1Q6ZS62 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.02■□□□□ 0.64
COLCA1Q6ZS62 AC131212.1-201ENST00000613771 668 ntBASIC19.02■□□□□ 0.64
COLCA1Q6ZS62 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.02■□□□□ 0.64
COLCA1Q6ZS62 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
COLCA1Q6ZS62 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
COLCA1Q6ZS62 GUSBP5-202ENST00000510805 1989 ntBASIC19.02■□□□□ 0.64
COLCA1Q6ZS62 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
COLCA1Q6ZS62 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
COLCA1Q6ZS62 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
COLCA1Q6ZS62 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COLCA1Q6ZS62 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
COLCA1Q6ZS62 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
COLCA1Q6ZS62 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COLCA1Q6ZS62 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
COLCA1Q6ZS62 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.01■□□□□ 0.63
COLCA1Q6ZS62 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COLCA1Q6ZS62 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
COLCA1Q6ZS62 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19■□□□□ 0.63
COLCA1Q6ZS62 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
COLCA1Q6ZS62 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
COLCA1Q6ZS62 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
COLCA1Q6ZS62 SERBP1P1-201ENST00000396021 1160 ntBASIC19■□□□□ 0.63
COLCA1Q6ZS62 PTCHD3P2-201ENST00000424937 1205 ntBASIC19■□□□□ 0.63
COLCA1Q6ZS62 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19■□□□□ 0.63
COLCA1Q6ZS62 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COLCA1Q6ZS62 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COLCA1Q6ZS62 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
COLCA1Q6ZS62 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
COLCA1Q6ZS62 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19■□□□□ 0.63
COLCA1Q6ZS62 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19■□□□□ 0.63
COLCA1Q6ZS62 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
COLCA1Q6ZS62 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.99■□□□□ 0.63
COLCA1Q6ZS62 SYT6-210ENST00000641643 1587 ntBASIC18.99■□□□□ 0.63
COLCA1Q6ZS62 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
COLCA1Q6ZS62 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
COLCA1Q6ZS62 AL136116.3-201ENST00000402907 1138 ntBASIC18.99■□□□□ 0.63
COLCA1Q6ZS62 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.99■□□□□ 0.63
COLCA1Q6ZS62 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
COLCA1Q6ZS62 CA15P2-201ENST00000611168 834 ntBASIC18.99■□□□□ 0.63
COLCA1Q6ZS62 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.99■□□□□ 0.63
COLCA1Q6ZS62 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
COLCA1Q6ZS62 ECEL1P1-201ENST00000373592 1742 ntBASIC18.99■□□□□ 0.63
COLCA1Q6ZS62 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC18.99■□□□□ 0.63
COLCA1Q6ZS62 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COLCA1Q6ZS62 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
COLCA1Q6ZS62 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COLCA1Q6ZS62 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COLCA1Q6ZS62 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
COLCA1Q6ZS62 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COLCA1Q6ZS62 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.98■□□□□ 0.63
COLCA1Q6ZS62 AC242852.2-201ENST00000615738 1807 ntBASIC18.98■□□□□ 0.63
COLCA1Q6ZS62 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
COLCA1Q6ZS62 OR2I1P-207ENST00000453522 948 ntBASIC18.98■□□□□ 0.63
COLCA1Q6ZS62 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.98■□□□□ 0.63
COLCA1Q6ZS62 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
COLCA1Q6ZS62 AC011298.3-201ENST00000615796 283 ntBASIC18.98■□□□□ 0.63
COLCA1Q6ZS62 AL031602.1-201ENST00000633169 911 ntBASIC18.98■□□□□ 0.63
COLCA1Q6ZS62 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COLCA1Q6ZS62 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COLCA1Q6ZS62 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COLCA1Q6ZS62 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms