Protein–RNA interactions for Protein: Q6P087

RPUSD3, Mitochondrial mRNA pseudouridine synthase RPUSD3, humanhuman

Known RBP Predictions only

Length 351 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3Q6P087 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
RPUSD3Q6P087 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.18■□□□□ 0.82
RPUSD3Q6P087 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.18■□□□□ 0.82
RPUSD3Q6P087 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
RPUSD3Q6P087 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.18■□□□□ 0.82
RPUSD3Q6P087 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RPUSD3Q6P087 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.18■□□□□ 0.82
RPUSD3Q6P087 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RPUSD3Q6P087 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.18■□□□□ 0.82
RPUSD3Q6P087 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.18■□□□□ 0.82
RPUSD3Q6P087 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.18■□□□□ 0.82
RPUSD3Q6P087 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RPUSD3Q6P087 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RPUSD3Q6P087 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RPUSD3Q6P087 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RPUSD3Q6P087 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.17■□□□□ 0.82
RPUSD3Q6P087 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RPUSD3Q6P087 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.17■□□□□ 0.82
RPUSD3Q6P087 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RPUSD3Q6P087 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.17■□□□□ 0.82
RPUSD3Q6P087 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
RPUSD3Q6P087 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.17■□□□□ 0.82
RPUSD3Q6P087 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
RPUSD3Q6P087 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RPUSD3Q6P087 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.17■□□□□ 0.82
RPUSD3Q6P087 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
RPUSD3Q6P087 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.17■□□□□ 0.82
RPUSD3Q6P087 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RPUSD3Q6P087 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RPUSD3Q6P087 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.16■□□□□ 0.82
RPUSD3Q6P087 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.16■□□□□ 0.82
RPUSD3Q6P087 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.16■□□□□ 0.82
RPUSD3Q6P087 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.16■□□□□ 0.82
RPUSD3Q6P087 AC105233.4-201ENST00000642045 216 ntBASIC20.16■□□□□ 0.82
RPUSD3Q6P087 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RPUSD3Q6P087 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
RPUSD3Q6P087 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RPUSD3Q6P087 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
RPUSD3Q6P087 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RPUSD3Q6P087 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RPUSD3Q6P087 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RPUSD3Q6P087 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RPUSD3Q6P087 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RPUSD3Q6P087 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
RPUSD3Q6P087 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.15■□□□□ 0.82
RPUSD3Q6P087 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RPUSD3Q6P087 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
RPUSD3Q6P087 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RPUSD3Q6P087 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RPUSD3Q6P087 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RPUSD3Q6P087 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RPUSD3Q6P087 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
RPUSD3Q6P087 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RPUSD3Q6P087 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
RPUSD3Q6P087 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
RPUSD3Q6P087 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RPUSD3Q6P087 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RPUSD3Q6P087 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.14■□□□□ 0.81
RPUSD3Q6P087 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
RPUSD3Q6P087 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.14■□□□□ 0.81
RPUSD3Q6P087 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.14■□□□□ 0.81
RPUSD3Q6P087 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.14■□□□□ 0.81
RPUSD3Q6P087 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.14■□□□□ 0.81
RPUSD3Q6P087 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.14■□□□□ 0.81
RPUSD3Q6P087 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.14■□□□□ 0.81
RPUSD3Q6P087 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RPUSD3Q6P087 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RPUSD3Q6P087 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RPUSD3Q6P087 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.13■□□□□ 0.81
RPUSD3Q6P087 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.13■□□□□ 0.81
RPUSD3Q6P087 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RPUSD3Q6P087 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RPUSD3Q6P087 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.13■□□□□ 0.81
RPUSD3Q6P087 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.13■□□□□ 0.81
RPUSD3Q6P087 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RPUSD3Q6P087 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RPUSD3Q6P087 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.13■□□□□ 0.81
RPUSD3Q6P087 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RPUSD3Q6P087 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.13■□□□□ 0.81
RPUSD3Q6P087 AC004911.1-201ENST00000416316 871 ntBASIC20.13■□□□□ 0.81
RPUSD3Q6P087 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.13■□□□□ 0.81
RPUSD3Q6P087 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.13■□□□□ 0.81
RPUSD3Q6P087 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
RPUSD3Q6P087 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.13■□□□□ 0.81
RPUSD3Q6P087 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RPUSD3Q6P087 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RPUSD3Q6P087 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RPUSD3Q6P087 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RPUSD3Q6P087 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RPUSD3Q6P087 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RPUSD3Q6P087 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RPUSD3Q6P087 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RPUSD3Q6P087 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.12■□□□□ 0.81
RPUSD3Q6P087 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RPUSD3Q6P087 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.12■□□□□ 0.81
RPUSD3Q6P087 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.12■□□□□ 0.81
RPUSD3Q6P087 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.12■□□□□ 0.81
RPUSD3Q6P087 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.12■□□□□ 0.81
RPUSD3Q6P087 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
RPUSD3Q6P087 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms