Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC58Q4VC31 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC58Q4VC31 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC58Q4VC31 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.65■□□□□ 0.74
CCDC58Q4VC31 C11orf96-202ENST00000528572 1834 ntBASIC19.65■□□□□ 0.74
CCDC58Q4VC31 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
CCDC58Q4VC31 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.64■□□□□ 0.74
CCDC58Q4VC31 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC58Q4VC31 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.64■□□□□ 0.74
CCDC58Q4VC31 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC58Q4VC31 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
CCDC58Q4VC31 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
CCDC58Q4VC31 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC58Q4VC31 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CCDC58Q4VC31 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC58Q4VC31 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC58Q4VC31 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC58Q4VC31 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CCDC58Q4VC31 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC58Q4VC31 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CCDC58Q4VC31 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC58Q4VC31 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC58Q4VC31 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC58Q4VC31 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC58Q4VC31 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.63■□□□□ 0.73
CCDC58Q4VC31 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC58Q4VC31 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC58Q4VC31 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC58Q4VC31 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC58Q4VC31 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC58Q4VC31 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC58Q4VC31 AC004448.1-201ENST00000458332 883 ntBASIC19.62■□□□□ 0.73
CCDC58Q4VC31 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CCDC58Q4VC31 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CCDC58Q4VC31 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC58Q4VC31 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC58Q4VC31 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC58Q4VC31 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CCDC58Q4VC31 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC58Q4VC31 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC58Q4VC31 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CCDC58Q4VC31 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC58Q4VC31 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC58Q4VC31 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC58Q4VC31 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
CCDC58Q4VC31 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC58Q4VC31 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC19.61■□□□□ 0.73
CCDC58Q4VC31 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CCDC58Q4VC31 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC58Q4VC31 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC58Q4VC31 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC58Q4VC31 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CCDC58Q4VC31 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.6■□□□□ 0.73
CCDC58Q4VC31 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC58Q4VC31 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CCDC58Q4VC31 AF131216.4-201ENST00000638924 1588 ntBASIC19.6■□□□□ 0.73
CCDC58Q4VC31 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC58Q4VC31 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC58Q4VC31 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC58Q4VC31 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.6■□□□□ 0.73
CCDC58Q4VC31 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC58Q4VC31 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CCDC58Q4VC31 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC58Q4VC31 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.59■□□□□ 0.73
CCDC58Q4VC31 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC58Q4VC31 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.59■□□□□ 0.73
CCDC58Q4VC31 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC58Q4VC31 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC58Q4VC31 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC58Q4VC31 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.59■□□□□ 0.73
CCDC58Q4VC31 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC58Q4VC31 U85056.1-201ENST00000616429 682 ntBASIC19.59■□□□□ 0.73
CCDC58Q4VC31 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC58Q4VC31 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC58Q4VC31 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC58Q4VC31 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CCDC58Q4VC31 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC58Q4VC31 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC58Q4VC31 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC58Q4VC31 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CCDC58Q4VC31 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC58Q4VC31 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC58Q4VC31 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC58Q4VC31 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.58■□□□□ 0.73
CCDC58Q4VC31 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC58Q4VC31 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC58Q4VC31 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.58■□□□□ 0.72
CCDC58Q4VC31 AC120024.1-201ENST00000562672 995 ntBASIC19.58■□□□□ 0.72
CCDC58Q4VC31 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC58Q4VC31 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
CCDC58Q4VC31 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC58Q4VC31 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC58Q4VC31 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
CCDC58Q4VC31 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC58Q4VC31 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
CCDC58Q4VC31 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC58Q4VC31 RARRES2P2-201ENST00000394842 485 ntBASIC19.57■□□□□ 0.72
CCDC58Q4VC31 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC58Q4VC31 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CCDC58Q4VC31 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms