Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC16.79■□□□□ 0.28
HIST1H1AQ02539 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC16.79■□□□□ 0.28
HIST1H1AQ02539 AC137630.3-201ENST00000607245 391 ntBASIC16.79■□□□□ 0.28
HIST1H1AQ02539 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC16.79■□□□□ 0.28
HIST1H1AQ02539 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HIST1H1AQ02539 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC16.79■□□□□ 0.28
HIST1H1AQ02539 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HIST1H1AQ02539 AC079630.1-202ENST00000618127 1840 ntBASIC16.79■□□□□ 0.28
HIST1H1AQ02539 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
HIST1H1AQ02539 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HIST1H1AQ02539 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HIST1H1AQ02539 ECEL1P1-201ENST00000373592 1742 ntBASIC16.79■□□□□ 0.28
HIST1H1AQ02539 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
HIST1H1AQ02539 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HIST1H1AQ02539 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC16.78■□□□□ 0.28
HIST1H1AQ02539 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HIST1H1AQ02539 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC16.78■□□□□ 0.28
HIST1H1AQ02539 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HIST1H1AQ02539 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HIST1H1AQ02539 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HIST1H1AQ02539 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HIST1H1AQ02539 BX664725.1-201ENST00000438252 379 ntBASIC16.78■□□□□ 0.28
HIST1H1AQ02539 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC16.78■□□□□ 0.28
HIST1H1AQ02539 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC16.78■□□□□ 0.28
HIST1H1AQ02539 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HIST1H1AQ02539 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
HIST1H1AQ02539 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC16.77■□□□□ 0.28
HIST1H1AQ02539 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC16.77■□□□□ 0.28
HIST1H1AQ02539 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
HIST1H1AQ02539 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC16.77■□□□□ 0.28
HIST1H1AQ02539 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HIST1H1AQ02539 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HIST1H1AQ02539 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
HIST1H1AQ02539 MYB-221ENST00000527615 2381 ntTSL 5 BASIC16.77■□□□□ 0.27
HIST1H1AQ02539 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
HIST1H1AQ02539 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC16.76■□□□□ 0.27
HIST1H1AQ02539 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HIST1H1AQ02539 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HIST1H1AQ02539 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HIST1H1AQ02539 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
HIST1H1AQ02539 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC16.76■□□□□ 0.27
HIST1H1AQ02539 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HIST1H1AQ02539 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HIST1H1AQ02539 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HIST1H1AQ02539 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HIST1H1AQ02539 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HIST1H1AQ02539 ESRRAP2-201ENST00000418437 1549 ntBASIC16.75■□□□□ 0.27
HIST1H1AQ02539 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
HIST1H1AQ02539 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HIST1H1AQ02539 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
HIST1H1AQ02539 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC16.75■□□□□ 0.27
HIST1H1AQ02539 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HIST1H1AQ02539 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HIST1H1AQ02539 SENP5-202ENST00000419026 973 ntTSL 3 BASIC16.75■□□□□ 0.27
HIST1H1AQ02539 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
HIST1H1AQ02539 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HIST1H1AQ02539 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HIST1H1AQ02539 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
HIST1H1AQ02539 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC16.75■□□□□ 0.27
HIST1H1AQ02539 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HIST1H1AQ02539 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
HIST1H1AQ02539 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HIST1H1AQ02539 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HIST1H1AQ02539 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC16.75■□□□□ 0.27
HIST1H1AQ02539 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HIST1H1AQ02539 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
HIST1H1AQ02539 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HIST1H1AQ02539 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
HIST1H1AQ02539 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HIST1H1AQ02539 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
HIST1H1AQ02539 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC16.74■□□□□ 0.27
HIST1H1AQ02539 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC16.74■□□□□ 0.27
HIST1H1AQ02539 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HIST1H1AQ02539 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
HIST1H1AQ02539 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC16.74■□□□□ 0.27
HIST1H1AQ02539 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC16.74■□□□□ 0.27
HIST1H1AQ02539 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HIST1H1AQ02539 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HIST1H1AQ02539 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HIST1H1AQ02539 GCA-201ENST00000233612 1694 ntTSL 2 BASIC16.74■□□□□ 0.27
HIST1H1AQ02539 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HIST1H1AQ02539 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
HIST1H1AQ02539 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HIST1H1AQ02539 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HIST1H1AQ02539 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HIST1H1AQ02539 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC16.73■□□□□ 0.27
HIST1H1AQ02539 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC16.73■□□□□ 0.27
HIST1H1AQ02539 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HIST1H1AQ02539 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HIST1H1AQ02539 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HIST1H1AQ02539 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HIST1H1AQ02539 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC16.73■□□□□ 0.27
HIST1H1AQ02539 CLTA-210ENST00000540080 989 ntTSL 2 BASIC16.73■□□□□ 0.27
HIST1H1AQ02539 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HIST1H1AQ02539 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC16.73■□□□□ 0.27
HIST1H1AQ02539 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
HIST1H1AQ02539 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HIST1H1AQ02539 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
HIST1H1AQ02539 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HIST1H1AQ02539 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms