Protein–RNA interactions for Protein: P60842

EIF4A1, Eukaryotic initiation factor 4A-I, humanhuman

Known RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1P60842 AC123595.1-201ENST00000440769 1046 ntBASIC28.45■■■□□ 2.14
EIF4A1P60842 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC28.45■■■□□ 2.14
EIF4A1P60842 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC28.45■■■□□ 2.14
EIF4A1P60842 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC28.45■■■□□ 2.14
EIF4A1P60842 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
EIF4A1P60842 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC28.44■■■□□ 2.14
EIF4A1P60842 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC28.44■■■□□ 2.14
EIF4A1P60842 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC28.44■■■□□ 2.14
EIF4A1P60842 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC28.44■■■□□ 2.14
EIF4A1P60842 DUX4L2-201ENST00000561772 1275 ntBASIC28.44■■■□□ 2.14
EIF4A1P60842 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC28.44■■■□□ 2.14
EIF4A1P60842 DUX4L6-201ENST00000626483 1275 ntBASIC28.44■■■□□ 2.14
EIF4A1P60842 DUX4L1-201ENST00000627662 1275 ntBASIC28.44■■■□□ 2.14
EIF4A1P60842 DUX4L8-201ENST00000629013 1275 ntBASIC28.44■■■□□ 2.14
EIF4A1P60842 DUX4L3-201ENST00000630187 1275 ntBASIC28.44■■■□□ 2.14
EIF4A1P60842 DUX4L7-201ENST00000630678 1275 ntBASIC28.44■■■□□ 2.14
EIF4A1P60842 DUX4L5-201ENST00000630834 1275 ntBASIC28.44■■■□□ 2.14
EIF4A1P60842 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC28.44■■■□□ 2.14
EIF4A1P60842 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC28.44■■■□□ 2.14
EIF4A1P60842 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
EIF4A1P60842 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
EIF4A1P60842 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC28.43■■■□□ 2.14
EIF4A1P60842 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC28.43■■■□□ 2.14
EIF4A1P60842 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC28.43■■■□□ 2.14
EIF4A1P60842 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC28.43■■■□□ 2.14
EIF4A1P60842 RARA-203ENST00000394086 2008 ntTSL 2 BASIC28.43■■■□□ 2.14
EIF4A1P60842 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
EIF4A1P60842 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC28.43■■■□□ 2.14
EIF4A1P60842 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC28.43■■■□□ 2.14
EIF4A1P60842 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC28.43■■■□□ 2.14
EIF4A1P60842 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
EIF4A1P60842 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC28.42■■■□□ 2.14
EIF4A1P60842 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC28.42■■■□□ 2.14
EIF4A1P60842 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC28.42■■■□□ 2.14
EIF4A1P60842 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC28.42■■■□□ 2.14
EIF4A1P60842 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
EIF4A1P60842 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC28.42■■■□□ 2.14
EIF4A1P60842 AC034268.1-201ENST00000441047 882 ntBASIC28.42■■■□□ 2.14
EIF4A1P60842 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC28.42■■■□□ 2.14
EIF4A1P60842 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC28.42■■■□□ 2.14
EIF4A1P60842 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC28.42■■■□□ 2.14
EIF4A1P60842 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
EIF4A1P60842 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
EIF4A1P60842 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC28.42■■■□□ 2.14
EIF4A1P60842 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
EIF4A1P60842 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
EIF4A1P60842 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC28.41■■■□□ 2.14
EIF4A1P60842 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC28.41■■■□□ 2.14
EIF4A1P60842 AC105233.4-201ENST00000642045 216 ntBASIC28.41■■■□□ 2.14
EIF4A1P60842 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC28.41■■■□□ 2.14
EIF4A1P60842 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
EIF4A1P60842 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC28.4■■■□□ 2.14
EIF4A1P60842 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC28.4■■■□□ 2.14
EIF4A1P60842 PARL-206ENST00000435888 1098 ntTSL 5 BASIC28.4■■■□□ 2.14
EIF4A1P60842 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
EIF4A1P60842 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC28.4■■■□□ 2.14
EIF4A1P60842 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC28.4■■■□□ 2.14
EIF4A1P60842 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC28.4■■■□□ 2.14
EIF4A1P60842 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC28.4■■■□□ 2.14
EIF4A1P60842 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
EIF4A1P60842 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC28.4■■■□□ 2.14
EIF4A1P60842 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
EIF4A1P60842 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
EIF4A1P60842 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
EIF4A1P60842 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC28.39■■■□□ 2.14
EIF4A1P60842 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
EIF4A1P60842 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC28.39■■■□□ 2.14
EIF4A1P60842 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC28.39■■■□□ 2.13
EIF4A1P60842 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC28.39■■■□□ 2.13
EIF4A1P60842 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC28.39■■■□□ 2.13
EIF4A1P60842 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC28.39■■■□□ 2.13
EIF4A1P60842 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC28.39■■■□□ 2.13
EIF4A1P60842 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC28.39■■■□□ 2.13
EIF4A1P60842 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC28.39■■■□□ 2.13
EIF4A1P60842 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
EIF4A1P60842 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC28.38■■■□□ 2.13
EIF4A1P60842 CCDC92B-201ENST00000575506 885 ntBASIC28.38■■■□□ 2.13
EIF4A1P60842 AC068587.7-201ENST00000641602 218 ntBASIC28.38■■■□□ 2.13
EIF4A1P60842 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC28.38■■■□□ 2.13
EIF4A1P60842 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC28.38■■■□□ 2.13
EIF4A1P60842 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC28.38■■■□□ 2.13
EIF4A1P60842 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
EIF4A1P60842 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
EIF4A1P60842 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
EIF4A1P60842 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
EIF4A1P60842 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC28.37■■■□□ 2.13
EIF4A1P60842 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
EIF4A1P60842 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC28.37■■■□□ 2.13
EIF4A1P60842 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
EIF4A1P60842 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
EIF4A1P60842 MPST-204ENST00000404393 1329 ntTSL 5 BASIC28.37■■■□□ 2.13
EIF4A1P60842 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC28.37■■■□□ 2.13
EIF4A1P60842 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC28.37■■■□□ 2.13
EIF4A1P60842 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
EIF4A1P60842 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
EIF4A1P60842 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC28.36■■■□□ 2.13
EIF4A1P60842 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC28.36■■■□□ 2.13
EIF4A1P60842 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC28.36■■■□□ 2.13
EIF4A1P60842 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
EIF4A1P60842 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms