Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NR1H2P55055 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
NR1H2P55055 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NR1H2P55055 Z92544.1-202ENST00000571933 1220 ntBASIC20.79■□□□□ 0.92
NR1H2P55055 AC131212.1-201ENST00000613771 668 ntBASIC20.79■□□□□ 0.92
NR1H2P55055 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
NR1H2P55055 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NR1H2P55055 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NR1H2P55055 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
NR1H2P55055 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NR1H2P55055 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.79■□□□□ 0.92
NR1H2P55055 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.78■□□□□ 0.92
NR1H2P55055 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.78■□□□□ 0.92
NR1H2P55055 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
NR1H2P55055 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
NR1H2P55055 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.78■□□□□ 0.92
NR1H2P55055 RNF165-205ENST00000588679 2904 ntBASIC20.78■□□□□ 0.92
NR1H2P55055 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
NR1H2P55055 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.78■□□□□ 0.92
NR1H2P55055 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.78■□□□□ 0.92
NR1H2P55055 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.78■□□□□ 0.92
NR1H2P55055 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.78■□□□□ 0.92
NR1H2P55055 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
NR1H2P55055 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
NR1H2P55055 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
NR1H2P55055 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
NR1H2P55055 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
NR1H2P55055 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NR1H2P55055 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NR1H2P55055 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NR1H2P55055 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NR1H2P55055 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
NR1H2P55055 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
NR1H2P55055 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.77■□□□□ 0.92
NR1H2P55055 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NR1H2P55055 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
NR1H2P55055 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NR1H2P55055 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NR1H2P55055 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
NR1H2P55055 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
NR1H2P55055 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.77■□□□□ 0.91
NR1H2P55055 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NR1H2P55055 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NR1H2P55055 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
NR1H2P55055 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.76■□□□□ 0.91
NR1H2P55055 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NR1H2P55055 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.76■□□□□ 0.91
NR1H2P55055 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
NR1H2P55055 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NR1H2P55055 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.76■□□□□ 0.91
NR1H2P55055 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
NR1H2P55055 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NR1H2P55055 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NR1H2P55055 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.75■□□□□ 0.91
NR1H2P55055 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NR1H2P55055 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.75■□□□□ 0.91
NR1H2P55055 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NR1H2P55055 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.75■□□□□ 0.91
NR1H2P55055 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.75■□□□□ 0.91
NR1H2P55055 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
NR1H2P55055 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NR1H2P55055 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NR1H2P55055 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.75■□□□□ 0.91
NR1H2P55055 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NR1H2P55055 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.74■□□□□ 0.91
NR1H2P55055 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NR1H2P55055 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NR1H2P55055 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NR1H2P55055 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
NR1H2P55055 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NR1H2P55055 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NR1H2P55055 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.74■□□□□ 0.91
NR1H2P55055 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
NR1H2P55055 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.74■□□□□ 0.91
NR1H2P55055 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NR1H2P55055 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NR1H2P55055 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.74■□□□□ 0.91
NR1H2P55055 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NR1H2P55055 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.73■□□□□ 0.91
NR1H2P55055 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.73■□□□□ 0.91
NR1H2P55055 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NR1H2P55055 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
NR1H2P55055 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
NR1H2P55055 AC239859.2-201ENST00000444165 318 ntBASIC20.73■□□□□ 0.91
NR1H2P55055 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.73■□□□□ 0.91
NR1H2P55055 AC139530.1-201ENST00000575312 1977 ntBASIC20.73■□□□□ 0.91
NR1H2P55055 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NR1H2P55055 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
NR1H2P55055 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.73■□□□□ 0.91
NR1H2P55055 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
NR1H2P55055 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NR1H2P55055 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.72■□□□□ 0.91
NR1H2P55055 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.72■□□□□ 0.91
NR1H2P55055 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NR1H2P55055 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
NR1H2P55055 KRT125P-201ENST00000546827 989 ntBASIC20.72■□□□□ 0.91
NR1H2P55055 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
NR1H2P55055 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NR1H2P55055 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NR1H2P55055 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms