Protein–RNA interactions for Protein: P53538

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, yeastyeast

Predicted RBP Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSU72P53538 YLF2YHL014C 1218 nt3.5□□□□□ -1.85
SSU72P53538 LOH1YJL038C 660 nt3.5□□□□□ -1.85
SSU72P53538 BAT2YJR148W 1131 nt3.5□□□□□ -1.85
SSU72P53538 MRP8YKL142W 660 nt3.5□□□□□ -1.85
SSU72P53538 IDP2YLR174W 1239 nt3.5□□□□□ -1.85
SSU72P53538 ATG8YBL078C 354 nt3.5□□□□□ -1.85
SSU72P53538 ECM23YPL021W 564 nt3.5□□□□□ -1.85
SSU72P53538 NSP1YJL041W 2472 nt3.5□□□□□ -1.85
SSU72P53538 ACE2YLR131C 2313 nt3.49□□□□□ -1.85
SSU72P53538 YRB30YGL164C 1323 nt3.49□□□□□ -1.85
SSU72P53538 ALG11YNL048W 1647 nt3.49□□□□□ -1.85
SSU72P53538 XRS2YDR369C 2565 nt3.49□□□□□ -1.85
SSU72P53538 YDR431WYDR431W 312 nt3.49□□□□□ -1.85
SSU72P53538 BMH1YER177W 804 nt3.49□□□□□ -1.85
SSU72P53538 YLR407WYLR407W 687 nt3.49□□□□□ -1.85
SSU72P53538 FDH2YPL275W 711 nt3.49□□□□□ -1.85
SSU72P53538 STP22YCL008C 1158 nt3.49□□□□□ -1.85
SSU72P53538 SPT16YGL207W 3108 nt3.49□□□□□ -1.85
SSU72P53538 LAS1YKR063C 1509 nt3.49□□□□□ -1.85
SSU72P53538 RPG1YBR079C 2895 nt3.49□□□□□ -1.85
SSU72P53538 PEX30YLR324W 1572 nt3.48□□□□□ -1.85
SSU72P53538 SPO77YLR341W 1434 nt3.48□□□□□ -1.85
SSU72P53538 RTS1YOR014W 2274 nt3.48□□□□□ -1.85
SSU72P53538 TRP4YDR354W 1143 nt3.48□□□□□ -1.85
SSU72P53538 YGR126WYGR126W 693 nt3.48□□□□□ -1.85
SSU72P53538 PRE9YGR135W 777 nt3.48□□□□□ -1.85
SSU72P53538 YIL171W-AYIL171W-A 453 nt3.48□□□□□ -1.85
SSU72P53538 YJL220WYJL220W 453 nt3.48□□□□□ -1.85
SSU72P53538 REG2YBR050C 1017 nt3.48□□□□□ -1.85
SSU72P53538 ICY2YPL250C 411 nt3.48□□□□□ -1.85
SSU72P53538 MCM7YBR202W 2538 nt3.48□□□□□ -1.85
SSU72P53538 GCR1YPL075W 2358 nt3.48□□□□□ -1.85
SSU72P53538 RIA1YNL163C 3333 nt3.48□□□□□ -1.85
SSU72P53538 DPH6YLR143W 2058 nt3.48□□□□□ -1.85
SSU72P53538 TYR1YBR166C 1359 nt3.48□□□□□ -1.85
SSU72P53538 IMG2YCR071C 441 nt3.47□□□□□ -1.85
SSU72P53538 THI13YDL244W 1023 nt3.47□□□□□ -1.85
SSU72P53538 SKI8YGL213C 1194 nt3.47□□□□□ -1.85
SSU72P53538 tQ(UUG)CtQ(UUG)C 72 nt3.47□□□□□ -1.85
SSU72P53538 tQ(UUG)D1tQ(UUG)D1 72 nt3.47□□□□□ -1.85
SSU72P53538 tQ(UUG)D2tQ(UUG)D2 72 nt3.47□□□□□ -1.85
SSU72P53538 tQ(UUG)D3tQ(UUG)D3 72 nt3.47□□□□□ -1.85
SSU72P53538 tQ(UUG)E1tQ(UUG)E1 72 nt3.47□□□□□ -1.85
SSU72P53538 tQ(UUG)HtQ(UUG)H 72 nt3.47□□□□□ -1.85
SSU72P53538 tQ(UUG)LtQ(UUG)L 72 nt3.47□□□□□ -1.85
SSU72P53538 RFC2YJR068W 1062 nt3.47□□□□□ -1.85
SSU72P53538 THI11YJR156C 1023 nt3.47□□□□□ -1.85
SSU72P53538 ECM15YBL001C 315 nt3.47□□□□□ -1.85
SSU72P53538 SHE1YBL031W 1017 nt3.47□□□□□ -1.85
SSU72P53538 PCL1YNL289W 840 nt3.47□□□□□ -1.85
SSU72P53538 PBN1YCL052C 1251 nt3.47□□□□□ -1.85
SSU72P53538 FYV5YCL058C 459 nt3.47□□□□□ -1.85
SSU72P53538 APP1YNL094W 1764 nt3.47□□□□□ -1.85
SSU72P53538 ZDS2YML109W 2829 nt3.47□□□□□ -1.85
SSU72P53538 MNR2YKL064W 2910 nt3.47□□□□□ -1.85
SSU72P53538 RSF2YJR127C 4143 nt3.46□□□□□ -1.85
SSU72P53538 SIP1YDR422C 2448 nt3.46□□□□□ -1.85
SSU72P53538 DEG1YFL001W 1329 nt3.46□□□□□ -1.85
SSU72P53538 FAS2YPL231W 5664 nt3.46□□□□□ -1.86
SSU72P53538 NGL3YML118W 1518 nt3.46□□□□□ -1.86
SSU72P53538 INO2YDR123C 915 nt3.46□□□□□ -1.86
SSU72P53538 YEL028WYEL028W 462 nt3.46□□□□□ -1.86
SSU72P53538 RAI1YGL246C 1164 nt3.46□□□□□ -1.86
SSU72P53538 YKT6YKL196C 603 nt3.46□□□□□ -1.86
SSU72P53538 PRM9YAR031W 897 nt3.46□□□□□ -1.86
SSU72P53538 CLD1YGR110W 1338 nt3.45□□□□□ -1.86
SSU72P53538 YDR526CYDR526C 471 nt3.45□□□□□ -1.86
SSU72P53538 CNB1YKL190W 528 nt3.45□□□□□ -1.86
SSU72P53538 FMP46YKR049C 402 nt3.45□□□□□ -1.86
SSU72P53538 YBL029WYBL029W 1131 nt3.45□□□□□ -1.86
SSU72P53538 TVP18YMR071C 504 nt3.45□□□□□ -1.86
SSU72P53538 YPL073CYPL073C 486 nt3.45□□□□□ -1.86
SSU72P53538 NRG2YBR066C 663 nt3.45□□□□□ -1.86
SSU72P53538 SMI1YGR229C 1518 nt3.44□□□□□ -1.86
SSU72P53538 TRF5YNL299W 1929 nt3.44□□□□□ -1.86
SSU72P53538 NUP159YIL115C 4383 nt3.44□□□□□ -1.86
SSU72P53538 RKM3YBR030W 1659 nt3.44□□□□□ -1.86
SSU72P53538 SMP3YOR149C 1551 nt3.44□□□□□ -1.86
SSU72P53538 FKH1YIL131C 1455 nt3.44□□□□□ -1.86
SSU72P53538 VPS68YOL129W 555 nt3.44□□□□□ -1.86
SSU72P53538 YPL162CYPL162C 822 nt3.44□□□□□ -1.86
SSU72P53538 MMT1YMR177W 1533 nt3.44□□□□□ -1.86
SSU72P53538 MAL13YGR288W 1422 nt3.44□□□□□ -1.86
SSU72P53538 FAR10YLR238W 1437 nt3.44□□□□□ -1.86
SSU72P53538 MIH1YMR036C 1665 nt3.43□□□□□ -1.86
SSU72P53538 MMS2YGL087C 414 nt3.43□□□□□ -1.86
SSU72P53538 SPO74YGL170C 1242 nt3.43□□□□□ -1.86
SSU72P53538 YHB1YGR234W 1200 nt3.43□□□□□ -1.86
SSU72P53538 YLR124WYLR124W 345 nt3.43□□□□□ -1.86
SSU72P53538 YMR010WYMR010W 1218 nt3.43□□□□□ -1.86
SSU72P53538 ASC1YMR116C 960 nt3.43□□□□□ -1.86
SSU72P53538 SIW14YNL032W 846 nt3.43□□□□□ -1.86
SSU72P53538 YNR042WYNR042W 429 nt3.43□□□□□ -1.86
SSU72P53538 OAZ1YPL052W 879 nt3.43□□□□□ -1.86
SSU72P53538 ARR1YPR199C 885 nt3.43□□□□□ -1.86
SSU72P53538 RAD4YER162C 2265 nt3.43□□□□□ -1.86
SSU72P53538 YJR030CYJR030C 2238 nt3.43□□□□□ -1.86
SSU72P53538 CHL1YPL008W 2586 nt3.43□□□□□ -1.86
SSU72P53538 RKM4YDR257C 1485 nt3.42□□□□□ -1.86
SSU72P53538 PWP2YCR057C 2772 nt3.42□□□□□ -1.86
Retrieved 100 of 7,029 protein–RNA pairs in 18.8 ms