Protein–RNA interactions for Protein: P47821

SSN8, RNA polymerase II holoenzyme cyclin-like subunit, yeastyeast

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSN8P47821 KAR5YMR065W 1515 nt4.01□□□□□ -1.77
SSN8P47821 GPI10YGL142C 1851 nt4.01□□□□□ -1.77
SSN8P47821 EAR1YMR171C 1653 nt4.01□□□□□ -1.77
SSN8P47821 SOF1YLL011W 1470 nt4.01□□□□□ -1.77
SSN8P47821 SAT4YCR008W 1812 nt4.01□□□□□ -1.77
SSN8P47821 YER138W-AYER138W-A 105 nt4.01□□□□□ -1.77
SSN8P47821 YHR069C-AYHR069C-A 363 nt4.01□□□□□ -1.77
SSN8P47821 SAE3YHR079C-A 276 nt4.01□□□□□ -1.77
SSN8P47821 NIT3YLR351C 876 nt4.01□□□□□ -1.77
SSN8P47821 YMR178WYMR178W 825 nt4.01□□□□□ -1.77
SSN8P47821 YBL107W-AYBL107W-A 105 nt4.01□□□□□ -1.77
SSN8P47821 CLN2YPL256C 1638 nt4.01□□□□□ -1.77
SSN8P47821 FMP25YLR077W 1752 nt4.01□□□□□ -1.77
SSN8P47821 RRB1YMR131C 1536 nt4□□□□□ -1.77
SSN8P47821 ATM1YMR301C 2073 nt4□□□□□ -1.77
SSN8P47821 YCR050CYCR050C 309 nt4□□□□□ -1.77
SSN8P47821 YCR101CYCR101C 549 nt4□□□□□ -1.77
SSN8P47821 COX4YGL187C 468 nt4□□□□□ -1.77
SSN8P47821 YGL188CYGL188C 174 nt4□□□□□ -1.77
SSN8P47821 LSB1YGR136W 726 nt4□□□□□ -1.77
SSN8P47821 OKP1YGR179C 1221 nt4□□□□□ -1.77
SSN8P47821 VPS29YHR012W 849 nt4□□□□□ -1.77
SSN8P47821 JLP1YLL057C 1239 nt4□□□□□ -1.77
SSN8P47821 RSF1YMR030W 1131 nt4□□□□□ -1.77
SSN8P47821 SSP2YOR242C 1116 nt4□□□□□ -1.77
SSN8P47821 YPR169W-AYPR169W-A 219 nt4□□□□□ -1.77
SSN8P47821 YPR170W-BYPR170W-B 258 nt4□□□□□ -1.77
SSN8P47821 ADP1YCR011C 3150 nt4□□□□□ -1.77
SSN8P47821 SYP1YCR030C 2613 nt4□□□□□ -1.77
SSN8P47821 YTM1YOR272W 1383 nt4□□□□□ -1.77
SSN8P47821 PEP5YMR231W 3090 nt3.99□□□□□ -1.77
SSN8P47821 KGD1YIL125W 3045 nt3.99□□□□□ -1.77
SSN8P47821 RPP1AYDL081C 321 nt3.99□□□□□ -1.77
SSN8P47821 ELF1YKL160W 438 nt3.99□□□□□ -1.77
SSN8P47821 APS1YLR170C 471 nt3.99□□□□□ -1.77
SSN8P47821 YLR311CYLR311C 348 nt3.99□□□□□ -1.77
SSN8P47821 SLZ1YNL196C 897 nt3.99□□□□□ -1.77
SSN8P47821 YBL094CYBL094C 333 nt3.99□□□□□ -1.77
SSN8P47821 YOL038C-AYOL038C-A 96 nt3.99□□□□□ -1.77
SSN8P47821 YOL166CYOL166C 339 nt3.99□□□□□ -1.77
SSN8P47821 MCD4YKL165C 2760 nt3.99□□□□□ -1.77
SSN8P47821 SEG1YMR086W 2883 nt3.99□□□□□ -1.77
SSN8P47821 YER158CYER158C 1722 nt3.98□□□□□ -1.77
SSN8P47821 APC4YDR118W 1959 nt3.98□□□□□ -1.77
SSN8P47821 YDR545C-AYDR545C-A 480 nt3.98□□□□□ -1.77
SSN8P47821 YEL077W-AYEL077W-A 483 nt3.98□□□□□ -1.77
SSN8P47821 YER190C-BYER190C-B 483 nt3.98□□□□□ -1.77
SSN8P47821 YFL068WYFL068W 483 nt3.98□□□□□ -1.77
SSN8P47821 YGL193CYGL193C 312 nt3.98□□□□□ -1.77
SSN8P47821 YGR296C-BYGR296C-B 483 nt3.98□□□□□ -1.77
SSN8P47821 YHL050W-AYHL050W-A 483 nt3.98□□□□□ -1.77
SSN8P47821 YHR219C-AYHR219C-A 483 nt3.98□□□□□ -1.77
SSN8P47821 YIL177W-AYIL177W-A 483 nt3.98□□□□□ -1.77
SSN8P47821 YJL225W-AYJL225W-A 483 nt3.98□□□□□ -1.77
SSN8P47821 YLL066W-AYLL066W-A 483 nt3.98□□□□□ -1.77
SSN8P47821 YLL067W-AYLL067W-A 483 nt3.98□□□□□ -1.77
SSN8P47821 SIC1YLR079W 855 nt3.98□□□□□ -1.77
SSN8P47821 SWC7YLR385C 399 nt3.98□□□□□ -1.77
SSN8P47821 YLR466C-AYLR466C-A 483 nt3.98□□□□□ -1.77
SSN8P47821 YLR467C-AYLR467C-A 483 nt3.98□□□□□ -1.77
SSN8P47821 YML133W-BYML133W-B 483 nt3.98□□□□□ -1.77
SSN8P47821 YNL339W-BYNL339W-B 483 nt3.98□□□□□ -1.77
SSN8P47821 AIM39YOL053W 1188 nt3.98□□□□□ -1.77
SSN8P47821 REX4YOL080C 870 nt3.98□□□□□ -1.77
SSN8P47821 YBL113W-AYBL113W-A 483 nt3.98□□□□□ -1.77
SSN8P47821 YOR396C-AYOR396C-A 483 nt3.98□□□□□ -1.77
SSN8P47821 YPL283W-BYPL283W-B 483 nt3.98□□□□□ -1.77
SSN8P47821 YPR204C-AYPR204C-A 483 nt3.98□□□□□ -1.77
SSN8P47821 CNS1YBR155W 1158 nt3.98□□□□□ -1.77
SSN8P47821 ABP140YOR239W 1887 nt3.98□□□□□ -1.77
SSN8P47821 RTC5YOR118W 1704 nt3.98□□□□□ -1.77
SSN8P47821 NPL4YBR170C 1743 nt3.98□□□□□ -1.77
SSN8P47821 NOP8YOL144W 1455 nt3.98□□□□□ -1.77
SSN8P47821 MET4YNL103W 2019 nt3.97□□□□□ -1.77
SSN8P47821 TDA6YPR157W 1404 nt3.97□□□□□ -1.77
SSN8P47821 YCR016WYCR016W 873 nt3.97□□□□□ -1.77
SSN8P47821 DDI2YFL061W 678 nt3.97□□□□□ -1.77
SSN8P47821 YGR149WYGR149W 1299 nt3.97□□□□□ -1.77
SSN8P47821 SED5YLR026C 1023 nt3.97□□□□□ -1.77
SSN8P47821 MTG1YMR097C 1104 nt3.97□□□□□ -1.77
SSN8P47821 TEX1YNL253W 1269 nt3.97□□□□□ -1.77
SSN8P47821 DDI3YNL335W 678 nt3.97□□□□□ -1.77
SSN8P47821 BUD17YNR027W 954 nt3.97□□□□□ -1.77
SSN8P47821 TIF5YPR041W 1218 nt3.97□□□□□ -1.77
SSN8P47821 MDM38YOL027C 1722 nt3.97□□□□□ -1.77
SSN8P47821 NHX1YDR456W 1902 nt3.97□□□□□ -1.77
SSN8P47821 PEX30YLR324W 1572 nt3.97□□□□□ -1.77
SSN8P47821 MIS1YBR084W 2928 nt3.97□□□□□ -1.77
SSN8P47821 RAD28YDR030C 1521 nt3.96□□□□□ -1.78
SSN8P47821 NGL3YML118W 1518 nt3.96□□□□□ -1.78
SSN8P47821 MSS2YDL107W 1056 nt3.96□□□□□ -1.78
SSN8P47821 NUS1YDL193W 1128 nt3.96□□□□□ -1.78
SSN8P47821 RPC17YJL011C 486 nt3.96□□□□□ -1.78
SSN8P47821 CTL1YMR180C 963 nt3.96□□□□□ -1.78
SSN8P47821 AAH1YNL141W 1044 nt3.96□□□□□ -1.78
SSN8P47821 TFB6YOR352W 1032 nt3.96□□□□□ -1.78
SSN8P47821 EFM2YBR271W 1260 nt3.96□□□□□ -1.78
SSN8P47821 SRO9YCL037C 1305 nt3.95□□□□□ -1.78
SSN8P47821 MMT1YMR177W 1533 nt3.95□□□□□ -1.78
SSN8P47821 MRPL39YML009C 213 nt3.95□□□□□ -1.78
Retrieved 100 of 7,029 protein–RNA pairs in 12.9 ms