Protein–RNA interactions for Protein: P42773

CDKN2C, Cyclin-dependent kinase 4 inhibitor C, humanhuman

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2CP42773 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDKN2CP42773 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDKN2CP42773 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.88■□□□□ 0.93
CDKN2CP42773 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CDKN2CP42773 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CDKN2CP42773 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDKN2CP42773 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CDKN2CP42773 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDKN2CP42773 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDKN2CP42773 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDKN2CP42773 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CDKN2CP42773 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.88■□□□□ 0.93
CDKN2CP42773 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CDKN2CP42773 C11orf96-202ENST00000528572 1834 ntBASIC20.88■□□□□ 0.93
CDKN2CP42773 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDKN2CP42773 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDKN2CP42773 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CDKN2CP42773 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDKN2CP42773 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CDKN2CP42773 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
CDKN2CP42773 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.87■□□□□ 0.93
CDKN2CP42773 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CDKN2CP42773 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDKN2CP42773 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDKN2CP42773 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.86■□□□□ 0.93
CDKN2CP42773 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CDKN2CP42773 FP325331.1-202ENST00000623531 1380 ntBASIC20.85■□□□□ 0.93
CDKN2CP42773 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
CDKN2CP42773 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CDKN2CP42773 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.85■□□□□ 0.93
CDKN2CP42773 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.85■□□□□ 0.93
CDKN2CP42773 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.85■□□□□ 0.93
CDKN2CP42773 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDKN2CP42773 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.85■□□□□ 0.93
CDKN2CP42773 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.85■□□□□ 0.93
CDKN2CP42773 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CDKN2CP42773 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDKN2CP42773 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDKN2CP42773 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDKN2CP42773 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.84■□□□□ 0.93
CDKN2CP42773 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.84■□□□□ 0.93
CDKN2CP42773 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDKN2CP42773 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDKN2CP42773 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDKN2CP42773 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.93
CDKN2CP42773 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.93
CDKN2CP42773 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.83■□□□□ 0.93
CDKN2CP42773 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CDKN2CP42773 AC092028.1-203ENST00000608262 953 ntBASIC20.83■□□□□ 0.93
CDKN2CP42773 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
CDKN2CP42773 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CDKN2CP42773 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.83■□□□□ 0.92
CDKN2CP42773 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CDKN2CP42773 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CDKN2CP42773 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDKN2CP42773 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.82■□□□□ 0.92
CDKN2CP42773 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDKN2CP42773 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDKN2CP42773 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDKN2CP42773 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.82■□□□□ 0.92
CDKN2CP42773 AC009102.2-201ENST00000606772 1639 ntBASIC20.82■□□□□ 0.92
CDKN2CP42773 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDKN2CP42773 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDKN2CP42773 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.81■□□□□ 0.92
CDKN2CP42773 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDKN2CP42773 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CDKN2CP42773 DUX4L4-201ENST00000566884 1269 ntBASIC20.81■□□□□ 0.92
CDKN2CP42773 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDKN2CP42773 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
CDKN2CP42773 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDKN2CP42773 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CDKN2CP42773 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDKN2CP42773 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDKN2CP42773 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
CDKN2CP42773 LINC01960-201ENST00000563759 1884 ntBASIC20.8■□□□□ 0.92
CDKN2CP42773 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.8■□□□□ 0.92
CDKN2CP42773 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
CDKN2CP42773 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
CDKN2CP42773 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDKN2CP42773 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
CDKN2CP42773 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
CDKN2CP42773 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.8■□□□□ 0.92
CDKN2CP42773 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CDKN2CP42773 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.8■□□□□ 0.92
CDKN2CP42773 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDKN2CP42773 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.79■□□□□ 0.92
CDKN2CP42773 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDKN2CP42773 FBXW4P1-201ENST00000426721 2239 ntBASIC20.79■□□□□ 0.92
CDKN2CP42773 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.79■□□□□ 0.92
CDKN2CP42773 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
CDKN2CP42773 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CDKN2CP42773 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
CDKN2CP42773 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.78■□□□□ 0.92
CDKN2CP42773 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDKN2CP42773 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDKN2CP42773 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.78■□□□□ 0.92
CDKN2CP42773 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CDKN2CP42773 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.78■□□□□ 0.92
CDKN2CP42773 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDKN2CP42773 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms