Protein–RNA interactions for Protein: P38936

CDKN1A, Cyclin-dependent kinase inhibitor 1, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1AP38936 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
CDKN1AP38936 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
CDKN1AP38936 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CDKN1AP38936 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDKN1AP38936 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDKN1AP38936 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDKN1AP38936 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.84■□□□□ 0.61
CDKN1AP38936 THRA-202ENST00000394121 2260 ntTSL 2 BASIC18.84■□□□□ 0.61
CDKN1AP38936 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDKN1AP38936 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDKN1AP38936 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDKN1AP38936 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDKN1AP38936 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.84■□□□□ 0.61
CDKN1AP38936 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.84■□□□□ 0.61
CDKN1AP38936 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.84■□□□□ 0.61
CDKN1AP38936 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.84■□□□□ 0.61
CDKN1AP38936 KRT18P14-201ENST00000534205 1250 ntBASIC18.84■□□□□ 0.61
CDKN1AP38936 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDKN1AP38936 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.84■□□□□ 0.61
CDKN1AP38936 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDKN1AP38936 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDKN1AP38936 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDKN1AP38936 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CDKN1AP38936 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
CDKN1AP38936 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDKN1AP38936 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDKN1AP38936 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CDKN1AP38936 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDKN1AP38936 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.83■□□□□ 0.6
CDKN1AP38936 AC004911.1-201ENST00000416316 871 ntBASIC18.83■□□□□ 0.6
CDKN1AP38936 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.83■□□□□ 0.6
CDKN1AP38936 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
CDKN1AP38936 AC092437.1-201ENST00000624794 1048 ntBASIC18.83■□□□□ 0.6
CDKN1AP38936 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CDKN1AP38936 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDKN1AP38936 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CDKN1AP38936 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CDKN1AP38936 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.82■□□□□ 0.6
CDKN1AP38936 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CDKN1AP38936 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDKN1AP38936 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC18.82■□□□□ 0.6
CDKN1AP38936 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDKN1AP38936 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.82■□□□□ 0.6
CDKN1AP38936 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDKN1AP38936 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.82■□□□□ 0.6
CDKN1AP38936 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.82■□□□□ 0.6
CDKN1AP38936 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CDKN1AP38936 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CDKN1AP38936 AC105233.4-201ENST00000642045 216 ntBASIC18.82■□□□□ 0.6
CDKN1AP38936 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDKN1AP38936 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CDKN1AP38936 EED-207ENST00000528180 1745 ntTSL 5 BASIC18.82■□□□□ 0.6
CDKN1AP38936 AC133561.1-201ENST00000568600 2415 ntBASIC18.82■□□□□ 0.6
CDKN1AP38936 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDKN1AP38936 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDKN1AP38936 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CDKN1AP38936 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDKN1AP38936 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDKN1AP38936 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDKN1AP38936 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDKN1AP38936 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.81■□□□□ 0.6
CDKN1AP38936 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDKN1AP38936 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.81■□□□□ 0.6
CDKN1AP38936 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDKN1AP38936 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.81■□□□□ 0.6
CDKN1AP38936 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDKN1AP38936 NTF6G-201ENST00000591094 616 ntBASIC18.81■□□□□ 0.6
CDKN1AP38936 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.81■□□□□ 0.6
CDKN1AP38936 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDKN1AP38936 LINC02228-203ENST00000641970 1355 ntBASIC18.81■□□□□ 0.6
CDKN1AP38936 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDKN1AP38936 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDKN1AP38936 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.8■□□□□ 0.6
CDKN1AP38936 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.8■□□□□ 0.6
CDKN1AP38936 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CDKN1AP38936 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDKN1AP38936 AP005435.1-201ENST00000529293 1178 ntBASIC18.8■□□□□ 0.6
CDKN1AP38936 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.8■□□□□ 0.6
CDKN1AP38936 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CDKN1AP38936 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.8■□□□□ 0.6
CDKN1AP38936 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC18.8■□□□□ 0.6
CDKN1AP38936 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
CDKN1AP38936 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDKN1AP38936 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC18.8■□□□□ 0.6
CDKN1AP38936 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.79■□□□□ 0.6
CDKN1AP38936 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDKN1AP38936 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDKN1AP38936 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDKN1AP38936 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDKN1AP38936 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.79■□□□□ 0.6
CDKN1AP38936 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDKN1AP38936 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.79■□□□□ 0.6
CDKN1AP38936 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDKN1AP38936 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.79■□□□□ 0.6
CDKN1AP38936 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDKN1AP38936 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC18.79■□□□□ 0.6
CDKN1AP38936 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CDKN1AP38936 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDKN1AP38936 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDKN1AP38936 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms