Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
BMP4P12644 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
BMP4P12644 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.1■□□□□ 0.81
BMP4P12644 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
BMP4P12644 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
BMP4P12644 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
BMP4P12644 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
BMP4P12644 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
BMP4P12644 TSPY9P-201ENST00000440215 945 ntBASIC20.1■□□□□ 0.81
BMP4P12644 TSPY11P-201ENST00000442607 1045 ntBASIC20.1■□□□□ 0.81
BMP4P12644 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.1■□□□□ 0.81
BMP4P12644 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
BMP4P12644 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
BMP4P12644 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
BMP4P12644 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.1■□□□□ 0.81
BMP4P12644 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.1■□□□□ 0.81
BMP4P12644 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
BMP4P12644 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
BMP4P12644 AC008406.3-201ENST00000620001 1374 ntBASIC20.09■□□□□ 0.81
BMP4P12644 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
BMP4P12644 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
BMP4P12644 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
BMP4P12644 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
BMP4P12644 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.09■□□□□ 0.81
BMP4P12644 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
BMP4P12644 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
BMP4P12644 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
BMP4P12644 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.09■□□□□ 0.81
BMP4P12644 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
BMP4P12644 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
BMP4P12644 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.09■□□□□ 0.81
BMP4P12644 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
BMP4P12644 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
BMP4P12644 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
BMP4P12644 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
BMP4P12644 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
BMP4P12644 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
BMP4P12644 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.08■□□□□ 0.81
BMP4P12644 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
BMP4P12644 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
BMP4P12644 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
BMP4P12644 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
BMP4P12644 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
BMP4P12644 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
BMP4P12644 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.08■□□□□ 0.8
BMP4P12644 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
BMP4P12644 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
BMP4P12644 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
BMP4P12644 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.07■□□□□ 0.8
BMP4P12644 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.07■□□□□ 0.8
BMP4P12644 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
BMP4P12644 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
BMP4P12644 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
BMP4P12644 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.07■□□□□ 0.8
BMP4P12644 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
BMP4P12644 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.07■□□□□ 0.8
BMP4P12644 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
BMP4P12644 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.07■□□□□ 0.8
BMP4P12644 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
BMP4P12644 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
BMP4P12644 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
BMP4P12644 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
BMP4P12644 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BMP4P12644 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BMP4P12644 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
BMP4P12644 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.06■□□□□ 0.8
BMP4P12644 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.06■□□□□ 0.8
BMP4P12644 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BMP4P12644 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
BMP4P12644 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BMP4P12644 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.06■□□□□ 0.8
BMP4P12644 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
BMP4P12644 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
BMP4P12644 UNC93B8-201ENST00000511903 705 ntBASIC20.06■□□□□ 0.8
BMP4P12644 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.06■□□□□ 0.8
BMP4P12644 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BMP4P12644 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BMP4P12644 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
BMP4P12644 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
BMP4P12644 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
BMP4P12644 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.06■□□□□ 0.8
BMP4P12644 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BMP4P12644 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.05■□□□□ 0.8
BMP4P12644 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
BMP4P12644 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BMP4P12644 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BMP4P12644 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
BMP4P12644 AC026310.3-201ENST00000625186 2373 ntBASIC20.05■□□□□ 0.8
BMP4P12644 C11orf96-202ENST00000528572 1834 ntBASIC20.05■□□□□ 0.8
BMP4P12644 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
BMP4P12644 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
BMP4P12644 MTDHP2-201ENST00000601468 714 ntBASIC20.05■□□□□ 0.8
BMP4P12644 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
BMP4P12644 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
BMP4P12644 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
BMP4P12644 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BMP4P12644 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BMP4P12644 PKD1P6-201ENST00000343738 4769 ntBASIC20.04■□□□□ 0.8
BMP4P12644 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
BMP4P12644 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms