Protein–RNA interactions for Protein: P0CX71

TY1A-ER1, Transposon Ty1-ER1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-ER1P0CX71 YCL068CYCL068C 783 nt5.36□□□□□ -1.55
TY1A-ER1P0CX71 CWC21YDR482C 408 nt5.36□□□□□ -1.55
TY1A-ER1P0CX71 MND1YGL183C 660 nt5.36□□□□□ -1.55
TY1A-ER1P0CX71 SPG1YGR236C 288 nt5.36□□□□□ -1.55
TY1A-ER1P0CX71 SPL2YHR136C 447 nt5.36□□□□□ -1.55
TY1A-ER1P0CX71 ARC15YIL062C 465 nt5.36□□□□□ -1.55
TY1A-ER1P0CX71 IRC21YMR073C 606 nt5.36□□□□□ -1.55
TY1A-ER1P0CX71 YNL035CYNL035C 1170 nt5.36□□□□□ -1.55
TY1A-ER1P0CX71 POR1YNL055C 852 nt5.36□□□□□ -1.55
TY1A-ER1P0CX71 GLN1YPR035W 1113 nt5.36□□□□□ -1.55
TY1A-ER1P0CX71 ARL1YBR164C 552 nt5.36□□□□□ -1.55
TY1A-ER1P0CX71 ERV15YBR210W 429 nt5.36□□□□□ -1.55
TY1A-ER1P0CX71 PHO5YBR093C 1404 nt5.36□□□□□ -1.55
TY1A-ER1P0CX71 ACA1YER045C 1470 nt5.36□□□□□ -1.55
TY1A-ER1P0CX71 GPB1YOR371C 2694 nt5.35□□□□□ -1.55
TY1A-ER1P0CX71 YIR007WYIR007W 2295 nt5.35□□□□□ -1.55
TY1A-ER1P0CX71 SST2YLR452C 2097 nt5.35□□□□□ -1.55
TY1A-ER1P0CX71 SIA1YOR137C 1869 nt5.35□□□□□ -1.55
TY1A-ER1P0CX71 NGL3YML118W 1518 nt5.35□□□□□ -1.55
TY1A-ER1P0CX71 GLO3YER122C 1482 nt5.35□□□□□ -1.55
TY1A-ER1P0CX71 COX15YER141W 1461 nt5.35□□□□□ -1.55
TY1A-ER1P0CX71 ISN1YOR155C 1353 nt5.35□□□□□ -1.55
TY1A-ER1P0CX71 RPS16BYDL083C 432 nt5.35□□□□□ -1.55
TY1A-ER1P0CX71 RSM18YER050C 417 nt5.35□□□□□ -1.55
TY1A-ER1P0CX71 GLC7YER133W 939 nt5.35□□□□□ -1.55
TY1A-ER1P0CX71 TAD2YJL035C 753 nt5.35□□□□□ -1.55
TY1A-ER1P0CX71 CYC1YJR048W 330 nt5.35□□□□□ -1.55
TY1A-ER1P0CX71 YNL122CYNL122C 348 nt5.35□□□□□ -1.55
TY1A-ER1P0CX71 YNR071CYNR071C 1029 nt5.35□□□□□ -1.55
TY1A-ER1P0CX71 POL30YBR088C 777 nt5.35□□□□□ -1.55
TY1A-ER1P0CX71 YBR124WYBR124W 360 nt5.35□□□□□ -1.55
TY1A-ER1P0CX71 BRE2YLR015W 1518 nt5.34□□□□□ -1.55
TY1A-ER1P0CX71 IOC4YMR044W 1428 nt5.34□□□□□ -1.55
TY1A-ER1P0CX71 HST3YOR025W 1344 nt5.34□□□□□ -1.55
TY1A-ER1P0CX71 VMA21YGR105W 234 nt5.34□□□□□ -1.55
TY1A-ER1P0CX71 CBP4YGR174C 513 nt5.34□□□□□ -1.55
TY1A-ER1P0CX71 MRS1YIR021W 1092 nt5.34□□□□□ -1.55
TY1A-ER1P0CX71 ATG36YJL185C 882 nt5.34□□□□□ -1.55
TY1A-ER1P0CX71 YJR011CYJR011C 786 nt5.34□□□□□ -1.55
TY1A-ER1P0CX71 YKL223WYKL223W 333 nt5.34□□□□□ -1.55
TY1A-ER1P0CX71 CRZ1YNL027W 2037 nt5.34□□□□□ -1.55
TY1A-ER1P0CX71 RET1YOR207C 3450 nt5.34□□□□□ -1.55
TY1A-ER1P0CX71 PLB3YOL011W 2061 nt5.33□□□□□ -1.56
TY1A-ER1P0CX71 NUD1YOR373W 2556 nt5.33□□□□□ -1.56
TY1A-ER1P0CX71 RPT6YGL048C 1218 nt5.33□□□□□ -1.56
TY1A-ER1P0CX71 TIM10YHR005C-A 282 nt5.33□□□□□ -1.56
TY1A-ER1P0CX71 LDS1YAL018C 978 nt5.33□□□□□ -1.56
TY1A-ER1P0CX71 YAR030CYAR030C 342 nt5.33□□□□□ -1.56
TY1A-ER1P0CX71 SEC13YLR208W 894 nt5.33□□□□□ -1.56
TY1A-ER1P0CX71 MOH1YBL049W 417 nt5.33□□□□□ -1.56
TY1A-ER1P0CX71 BRX1YOL077C 876 nt5.33□□□□□ -1.56
TY1A-ER1P0CX71 YOL163WYOL163W 510 nt5.33□□□□□ -1.56
TY1A-ER1P0CX71 CPA1YOR303W 1236 nt5.33□□□□□ -1.56
TY1A-ER1P0CX71 DOT1YDR440W 1749 nt5.33□□□□□ -1.56
TY1A-ER1P0CX71 HAP4YKL109W 1665 nt5.33□□□□□ -1.56
TY1A-ER1P0CX71 UBA1YKL210W 3075 nt5.33□□□□□ -1.56
TY1A-ER1P0CX71 APN2YBL019W 1563 nt5.33□□□□□ -1.56
TY1A-ER1P0CX71 TSL1YML100W 3297 nt5.33□□□□□ -1.56
TY1A-ER1P0CX71 AGE1YDR524C 1449 nt5.32□□□□□ -1.56
TY1A-ER1P0CX71 ARB1YER036C 1833 nt5.32□□□□□ -1.56
TY1A-ER1P0CX71 EMP47YFL048C 1338 nt5.32□□□□□ -1.56
TY1A-ER1P0CX71 VPS30YPL120W 1674 nt5.32□□□□□ -1.56
TY1A-ER1P0CX71 YDR018CYDR018C 1191 nt5.32□□□□□ -1.56
TY1A-ER1P0CX71 MIG2YGL209W 1149 nt5.32□□□□□ -1.56
TY1A-ER1P0CX71 YHR212W-AYHR212W-A 204 nt5.32□□□□□ -1.56
TY1A-ER1P0CX71 LOH1YJL038C 660 nt5.32□□□□□ -1.56
TY1A-ER1P0CX71 RPE1YJL121C 717 nt5.32□□□□□ -1.56
TY1A-ER1P0CX71 YAL034C-BYAL034C-B 354 nt5.32□□□□□ -1.56
TY1A-ER1P0CX71 YKL023C-AYKL023C-A 228 nt5.32□□□□□ -1.56
TY1A-ER1P0CX71 POM33YLL023C 840 nt5.32□□□□□ -1.56
TY1A-ER1P0CX71 YAR061WYAR061W 204 nt5.32□□□□□ -1.56
TY1A-ER1P0CX71 FPR3YML074C 1236 nt5.32□□□□□ -1.56
TY1A-ER1P0CX71 YML122CYML122C 381 nt5.32□□□□□ -1.56
TY1A-ER1P0CX71 TSR4YOL022C 1227 nt5.32□□□□□ -1.56
TY1A-ER1P0CX71 SLG1YOR008C 1137 nt5.32□□□□□ -1.56
TY1A-ER1P0CX71 GPB2YAL056W 2643 nt5.32□□□□□ -1.56
TY1A-ER1P0CX71 UTP18YJL069C 1785 nt5.32□□□□□ -1.56
TY1A-ER1P0CX71 HRQ1YDR291W 3234 nt5.31□□□□□ -1.56
TY1A-ER1P0CX71 ARG4YHR018C 1392 nt5.31□□□□□ -1.56
TY1A-ER1P0CX71 TBF1YPL128C 1689 nt5.31□□□□□ -1.56
TY1A-ER1P0CX71 YDL050CYDL050C 372 nt5.31□□□□□ -1.56
TY1A-ER1P0CX71 YDL172CYDL172C 480 nt5.31□□□□□ -1.56
TY1A-ER1P0CX71 TIM22YDL217C 624 nt5.31□□□□□ -1.56
TY1A-ER1P0CX71 YDR461C-AYDR461C-A 243 nt5.31□□□□□ -1.56
TY1A-ER1P0CX71 VMA3YEL027W 483 nt5.31□□□□□ -1.56
TY1A-ER1P0CX71 TMT1YER175C 900 nt5.31□□□□□ -1.56
TY1A-ER1P0CX71 YGL081WYGL081W 963 nt5.31□□□□□ -1.56
TY1A-ER1P0CX71 YIL161WYIL161W 708 nt5.31□□□□□ -1.56
TY1A-ER1P0CX71 RNR2YJL026W 1200 nt5.31□□□□□ -1.56
TY1A-ER1P0CX71 YKL131WYKL131W 522 nt5.31□□□□□ -1.56
TY1A-ER1P0CX71 PRM6YML047C 1059 nt5.31□□□□□ -1.56
TY1A-ER1P0CX71 KSH1YNL024C-A 219 nt5.31□□□□□ -1.56
TY1A-ER1P0CX71 UTP23YOR004W 765 nt5.31□□□□□ -1.56
TY1A-ER1P0CX71 FYV12YOR183W 390 nt5.31□□□□□ -1.56
TY1A-ER1P0CX71 LGE1YPL055C 999 nt5.31□□□□□ -1.56
TY1A-ER1P0CX71 snR30snR30 606 nt5.31□□□□□ -1.56
TY1A-ER1P0CX71 DCC1YCL016C 1143 nt5.31□□□□□ -1.56
TY1A-ER1P0CX71 RNR3YIL066C 2610 nt5.31□□□□□ -1.56
TY1A-ER1P0CX71 FAR10YLR238W 1437 nt5.31□□□□□ -1.56
TY1A-ER1P0CX71 TMA64YDR117C 1698 nt5.31□□□□□ -1.56
Retrieved 100 of 7,029 protein–RNA pairs in 19.7 ms