Protein–RNA interactions for Protein: P0C7T8

TMEM253, Transmembrane protein 253, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253P0C7T8 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
TMEM253P0C7T8 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
TMEM253P0C7T8 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
TMEM253P0C7T8 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
TMEM253P0C7T8 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
TMEM253P0C7T8 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC23.39■■□□□ 1.33
TMEM253P0C7T8 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
TMEM253P0C7T8 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC23.38■■□□□ 1.33
TMEM253P0C7T8 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
TMEM253P0C7T8 MTDHP2-201ENST00000601468 714 ntBASIC23.38■■□□□ 1.33
TMEM253P0C7T8 MIR4787-201ENST00000607364 84 ntBASIC23.38■■□□□ 1.33
TMEM253P0C7T8 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC23.38■■□□□ 1.33
TMEM253P0C7T8 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TMEM253P0C7T8 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
TMEM253P0C7T8 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
TMEM253P0C7T8 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
TMEM253P0C7T8 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
TMEM253P0C7T8 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC23.38■■□□□ 1.33
TMEM253P0C7T8 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.38■■□□□ 1.33
TMEM253P0C7T8 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC23.38■■□□□ 1.33
TMEM253P0C7T8 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TMEM253P0C7T8 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC23.37■■□□□ 1.33
TMEM253P0C7T8 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC23.37■■□□□ 1.33
TMEM253P0C7T8 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
TMEM253P0C7T8 CD72-202ENST00000378430 585 ntTSL 3 BASIC23.37■■□□□ 1.33
TMEM253P0C7T8 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
TMEM253P0C7T8 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
TMEM253P0C7T8 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TMEM253P0C7T8 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
TMEM253P0C7T8 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC23.37■■□□□ 1.33
TMEM253P0C7T8 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
TMEM253P0C7T8 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TMEM253P0C7T8 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
TMEM253P0C7T8 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
TMEM253P0C7T8 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TMEM253P0C7T8 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
TMEM253P0C7T8 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC23.36■■□□□ 1.33
TMEM253P0C7T8 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC23.36■■□□□ 1.33
TMEM253P0C7T8 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
TMEM253P0C7T8 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC23.36■■□□□ 1.33
TMEM253P0C7T8 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC23.36■■□□□ 1.33
TMEM253P0C7T8 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC23.36■■□□□ 1.33
TMEM253P0C7T8 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TMEM253P0C7T8 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TMEM253P0C7T8 LINC01960-201ENST00000563759 1884 ntBASIC23.36■■□□□ 1.33
TMEM253P0C7T8 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.36■■□□□ 1.33
TMEM253P0C7T8 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TMEM253P0C7T8 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC23.35■■□□□ 1.33
TMEM253P0C7T8 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TMEM253P0C7T8 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC23.35■■□□□ 1.33
TMEM253P0C7T8 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
TMEM253P0C7T8 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.35■■□□□ 1.33
TMEM253P0C7T8 HES6-204ENST00000409182 863 ntTSL 2 BASIC23.35■■□□□ 1.33
TMEM253P0C7T8 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TMEM253P0C7T8 EXOG-217ENST00000630638 197 ntTSL 5 BASIC23.35■■□□□ 1.33
TMEM253P0C7T8 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TMEM253P0C7T8 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
TMEM253P0C7T8 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC23.35■■□□□ 1.33
TMEM253P0C7T8 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
TMEM253P0C7T8 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TMEM253P0C7T8 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
TMEM253P0C7T8 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TMEM253P0C7T8 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TMEM253P0C7T8 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC23.34■■□□□ 1.33
TMEM253P0C7T8 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TMEM253P0C7T8 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
TMEM253P0C7T8 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC23.33■■□□□ 1.33
TMEM253P0C7T8 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC23.33■■□□□ 1.33
TMEM253P0C7T8 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC23.33■■□□□ 1.33
TMEM253P0C7T8 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC23.33■■□□□ 1.33
TMEM253P0C7T8 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TMEM253P0C7T8 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.33■■□□□ 1.33
TMEM253P0C7T8 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
TMEM253P0C7T8 RARRES2P1-201ENST00000474487 481 ntBASIC23.33■■□□□ 1.33
TMEM253P0C7T8 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
TMEM253P0C7T8 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
TMEM253P0C7T8 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC23.33■■□□□ 1.32
TMEM253P0C7T8 C17orf82-201ENST00000623772 1530 ntBASIC23.33■■□□□ 1.32
TMEM253P0C7T8 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
TMEM253P0C7T8 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
TMEM253P0C7T8 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
TMEM253P0C7T8 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC23.32■■□□□ 1.32
TMEM253P0C7T8 AC010997.5-201ENST00000609182 354 ntBASIC23.32■■□□□ 1.32
TMEM253P0C7T8 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC23.32■■□□□ 1.32
TMEM253P0C7T8 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC23.32■■□□□ 1.32
TMEM253P0C7T8 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TMEM253P0C7T8 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC23.31■■□□□ 1.32
TMEM253P0C7T8 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
TMEM253P0C7T8 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TMEM253P0C7T8 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TMEM253P0C7T8 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
TMEM253P0C7T8 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TMEM253P0C7T8 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC23.31■■□□□ 1.32
TMEM253P0C7T8 AC239859.2-201ENST00000444165 318 ntBASIC23.31■■□□□ 1.32
TMEM253P0C7T8 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.31■■□□□ 1.32
TMEM253P0C7T8 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TMEM253P0C7T8 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
TMEM253P0C7T8 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TMEM253P0C7T8 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
TMEM253P0C7T8 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC23.31■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms