Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
HOXC6P09630 AP004607.4-201ENST00000530158 1459 ntBASIC25.2■■□□□ 1.62
HOXC6P09630 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
HOXC6P09630 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
HOXC6P09630 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
HOXC6P09630 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
HOXC6P09630 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
HOXC6P09630 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
HOXC6P09630 STX7-201ENST00000367937 1090 ntTSL 5 BASIC25.19■■□□□ 1.62
HOXC6P09630 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
HOXC6P09630 AC137761.2-201ENST00000561729 223 ntBASIC25.19■■□□□ 1.62
HOXC6P09630 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC25.19■■□□□ 1.62
HOXC6P09630 AC145350.3-201ENST00000569033 163 ntBASIC25.19■■□□□ 1.62
HOXC6P09630 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
HOXC6P09630 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
HOXC6P09630 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
HOXC6P09630 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC25.18■■□□□ 1.62
HOXC6P09630 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
HOXC6P09630 AC016769.1-201ENST00000409132 1010 ntBASIC25.18■■□□□ 1.62
HOXC6P09630 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC25.18■■□□□ 1.62
HOXC6P09630 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC25.18■■□□□ 1.62
HOXC6P09630 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
HOXC6P09630 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC25.18■■□□□ 1.62
HOXC6P09630 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
HOXC6P09630 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
HOXC6P09630 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
HOXC6P09630 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
HOXC6P09630 DBI-210ENST00000542275 757 ntTSL 5 BASIC25.17■■□□□ 1.62
HOXC6P09630 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC25.17■■□□□ 1.62
HOXC6P09630 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
HOXC6P09630 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
HOXC6P09630 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
HOXC6P09630 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
HOXC6P09630 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC25.16■■□□□ 1.62
HOXC6P09630 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
HOXC6P09630 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
HOXC6P09630 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC25.16■■□□□ 1.62
HOXC6P09630 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC25.16■■□□□ 1.62
HOXC6P09630 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC25.16■■□□□ 1.62
HOXC6P09630 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC25.16■■□□□ 1.62
HOXC6P09630 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
HOXC6P09630 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
HOXC6P09630 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC25.15■■□□□ 1.62
HOXC6P09630 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
HOXC6P09630 COX20-201ENST00000366528 568 ntTSL 2 BASIC25.15■■□□□ 1.62
HOXC6P09630 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC25.15■■□□□ 1.62
HOXC6P09630 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.62
HOXC6P09630 AC004854.2-201ENST00000608450 1441 ntBASIC25.14■■□□□ 1.62
HOXC6P09630 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC25.14■■□□□ 1.62
HOXC6P09630 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
HOXC6P09630 BX005040.4-201ENST00000637145 1518 ntBASIC25.14■■□□□ 1.62
HOXC6P09630 EMC9-206ENST00000560403 872 ntTSL 2 BASIC25.14■■□□□ 1.62
HOXC6P09630 GXYLT1P5-201ENST00000614548 1189 ntBASIC25.14■■□□□ 1.62
HOXC6P09630 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.61
HOXC6P09630 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
HOXC6P09630 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC25.13■■□□□ 1.61
HOXC6P09630 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC25.13■■□□□ 1.61
HOXC6P09630 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
HOXC6P09630 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
HOXC6P09630 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
HOXC6P09630 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC25.13■■□□□ 1.61
HOXC6P09630 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
HOXC6P09630 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
HOXC6P09630 AC026185.1-201ENST00000445748 174 ntBASIC25.13■■□□□ 1.61
HOXC6P09630 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
HOXC6P09630 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
HOXC6P09630 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
HOXC6P09630 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC25.12■■□□□ 1.61
HOXC6P09630 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC25.12■■□□□ 1.61
HOXC6P09630 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC25.12■■□□□ 1.61
HOXC6P09630 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC25.12■■□□□ 1.61
HOXC6P09630 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC25.12■■□□□ 1.61
HOXC6P09630 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
HOXC6P09630 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
HOXC6P09630 AC068587.7-201ENST00000641602 218 ntBASIC25.12■■□□□ 1.61
HOXC6P09630 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC25.12■■□□□ 1.61
HOXC6P09630 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
HOXC6P09630 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
HOXC6P09630 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC25.11■■□□□ 1.61
HOXC6P09630 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
HOXC6P09630 WWOX-218ENST00000627394 894 ntTSL 5 BASIC25.11■■□□□ 1.61
HOXC6P09630 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC25.11■■□□□ 1.61
HOXC6P09630 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC25.11■■□□□ 1.61
HOXC6P09630 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
HOXC6P09630 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
HOXC6P09630 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
HOXC6P09630 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
HOXC6P09630 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
HOXC6P09630 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
HOXC6P09630 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
HOXC6P09630 PPP1R14BP3-201ENST00000509033 445 ntBASIC25.1■■□□□ 1.61
HOXC6P09630 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
HOXC6P09630 BID-214ENST00000617586 542 ntTSL 5 BASIC25.1■■□□□ 1.61
HOXC6P09630 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
HOXC6P09630 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
HOXC6P09630 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC25.1■■□□□ 1.61
HOXC6P09630 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
HOXC6P09630 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC25.09■■□□□ 1.61
HOXC6P09630 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
HOXC6P09630 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms