Protein–RNA interactions for Protein: P04819

CDC9, DNA ligase 1, yeastyeast

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC9P04819 TAF14YPL129W 735 nt5□□□□□ -1.61
CDC9P04819 UMP1YBR173C 447 nt5□□□□□ -1.61
CDC9P04819 RAT1YOR048C 3021 nt5□□□□□ -1.61
CDC9P04819 NDC1YML031W 1968 nt5□□□□□ -1.61
CDC9P04819 FZO1YBR179C 2568 nt5□□□□□ -1.61
CDC9P04819 MIG1YGL035C 1515 nt4.99□□□□□ -1.61
CDC9P04819 UBC9YDL064W 474 nt4.99□□□□□ -1.61
CDC9P04819 SUR2YDR297W 1050 nt4.99□□□□□ -1.61
CDC9P04819 SLO1YER180C-A 258 nt4.99□□□□□ -1.61
CDC9P04819 TOS8YGL096W 831 nt4.99□□□□□ -1.61
CDC9P04819 CWC23YGL128C 852 nt4.99□□□□□ -1.61
CDC9P04819 HSX1tR(CCU)J 72 nt4.99□□□□□ -1.61
CDC9P04819 YIR023C-AYIR023C-A 324 nt4.99□□□□□ -1.61
CDC9P04819 SFH1YLR321C 1281 nt4.99□□□□□ -1.61
CDC9P04819 FAR3YMR052W 615 nt4.99□□□□□ -1.61
CDC9P04819 EOS1YNL080C 1101 nt4.99□□□□□ -1.61
CDC9P04819 RPS15YOL040C 429 nt4.99□□□□□ -1.61
CDC9P04819 PIN2YOR104W 849 nt4.99□□□□□ -1.61
CDC9P04819 OXR1YPL196W 822 nt4.99□□□□□ -1.61
CDC9P04819 YPR153WYPR153W 423 nt4.99□□□□□ -1.61
CDC9P04819 CLG1YGL215W 1359 nt4.99□□□□□ -1.61
CDC9P04819 SPT14YPL175W 1359 nt4.99□□□□□ -1.61
CDC9P04819 BI3Q0115 1554 nt4.99□□□□□ -1.61
CDC9P04819 SOG2YOR353C 2376 nt4.98□□□□□ -1.61
CDC9P04819 YCR007CYCR007C 720 nt4.98□□□□□ -1.61
CDC9P04819 KRE28YDR532C 1158 nt4.98□□□□□ -1.61
CDC9P04819 CDC8YJR057W 651 nt4.98□□□□□ -1.61
CDC9P04819 SUB1YMR039C 879 nt4.98□□□□□ -1.61
CDC9P04819 YBL044WYBL044W 369 nt4.98□□□□□ -1.61
CDC9P04819 CUZ1YNL155W 825 nt4.98□□□□□ -1.61
CDC9P04819 DUG3YNL191W 1074 nt4.98□□□□□ -1.61
CDC9P04819 YNL296WYNL296W 315 nt4.98□□□□□ -1.61
CDC9P04819 MCK1YNL307C 1128 nt4.98□□□□□ -1.61
CDC9P04819 snR11snR11 258 nt4.98□□□□□ -1.61
CDC9P04819 SAM4YPL273W 978 nt4.98□□□□□ -1.61
CDC9P04819 MMP1YLL061W 1752 nt4.98□□□□□ -1.61
CDC9P04819 APP1YNL094W 1764 nt4.98□□□□□ -1.61
CDC9P04819 RPT4YOR259C 1314 nt4.97□□□□□ -1.61
CDC9P04819 TDA11YHR159W 1515 nt4.97□□□□□ -1.61
CDC9P04819 YNL095CYNL095C 1929 nt4.97□□□□□ -1.61
CDC9P04819 SEC9YGR009C 1956 nt4.97□□□□□ -1.61
CDC9P04819 IMA1YGR287C 1770 nt4.97□□□□□ -1.61
CDC9P04819 COX26YDR119W-A 201 nt4.97□□□□□ -1.61
CDC9P04819 ZRT1YGL255W 1131 nt4.97□□□□□ -1.61
CDC9P04819 NAT2YGR147C 867 nt4.97□□□□□ -1.61
CDC9P04819 PHO86YJL117W 936 nt4.97□□□□□ -1.61
CDC9P04819 YLR296WYLR296W 327 nt4.97□□□□□ -1.61
CDC9P04819 YNL035CYNL035C 1170 nt4.97□□□□□ -1.61
CDC9P04819 YOR318CYOR318C 306 nt4.97□□□□□ -1.61
CDC9P04819 YDR261W-AYDR261W-A 1317 nt4.97□□□□□ -1.61
CDC9P04819 SAC1YKL212W 1872 nt4.96□□□□□ -1.61
CDC9P04819 IKS1YJL057C 2004 nt4.96□□□□□ -1.62
CDC9P04819 BOI2YER114C 3123 nt4.96□□□□□ -1.62
CDC9P04819 MGA1YGR249W 1371 nt4.96□□□□□ -1.62
CDC9P04819 SPB4YFL002C 1821 nt4.96□□□□□ -1.62
CDC9P04819 GLO2YDR272W 825 nt4.96□□□□□ -1.62
CDC9P04819 YGL185CYGL185C 1140 nt4.96□□□□□ -1.62
CDC9P04819 YGL204CYGL204C 306 nt4.96□□□□□ -1.62
CDC9P04819 LST7YGR057C 729 nt4.96□□□□□ -1.62
CDC9P04819 PUS6YGR169C 1215 nt4.96□□□□□ -1.62
CDC9P04819 DOG2YHR043C 741 nt4.96□□□□□ -1.62
CDC9P04819 DOG1YHR044C 741 nt4.96□□□□□ -1.62
CDC9P04819 COS9YKL219W 1224 nt4.96□□□□□ -1.62
CDC9P04819 YNL320WYNL320W 855 nt4.96□□□□□ -1.62
CDC9P04819 TPT1YOL102C 693 nt4.96□□□□□ -1.62
CDC9P04819 OPY1YBR129C 987 nt4.96□□□□□ -1.62
CDC9P04819 YGL036WYGL036W 2730 nt4.96□□□□□ -1.62
CDC9P04819 HUL4YJR036C 2679 nt4.96□□□□□ -1.62
CDC9P04819 GAS4YOL132W 1416 nt4.96□□□□□ -1.62
CDC9P04819 UTP18YJL069C 1785 nt4.96□□□□□ -1.62
CDC9P04819 YDR029WYDR029W 315 nt4.95□□□□□ -1.62
CDC9P04819 PRO3YER023W 861 nt4.95□□□□□ -1.62
CDC9P04819 CDC43YGL155W 1131 nt4.95□□□□□ -1.62
CDC9P04819 CAB2YIL083C 1098 nt4.95□□□□□ -1.62
CDC9P04819 DAL2YIR029W 1032 nt4.95□□□□□ -1.62
CDC9P04819 ATP14YLR295C 375 nt4.95□□□□□ -1.62
CDC9P04819 YLR444CYLR444C 303 nt4.95□□□□□ -1.62
CDC9P04819 YML119WYML119W 1074 nt4.95□□□□□ -1.62
CDC9P04819 YMR099CYMR099C 894 nt4.95□□□□□ -1.62
CDC9P04819 SLZ1YNL196C 897 nt4.95□□□□□ -1.62
CDC9P04819 MDM12YOL009C 816 nt4.95□□□□□ -1.62
CDC9P04819 YOL097W-AYOL097W-A 186 nt4.95□□□□□ -1.62
CDC9P04819 YBR287WYBR287W 1284 nt4.95□□□□□ -1.62
CDC9P04819 MCM2YBL023C 2607 nt4.95□□□□□ -1.62
CDC9P04819 VID30YGL227W 2877 nt4.95□□□□□ -1.62
CDC9P04819 APN2YBL019W 1563 nt4.95□□□□□ -1.62
CDC9P04819 GAL4YPL248C 2646 nt4.94□□□□□ -1.62
CDC9P04819 SSZ1YHR064C 1617 nt4.94□□□□□ -1.62
CDC9P04819 ATE1YGL017W 1512 nt4.94□□□□□ -1.62
CDC9P04819 RGT1YKL038W 3513 nt4.94□□□□□ -1.62
CDC9P04819 IWR1YDL115C 1062 nt4.94□□□□□ -1.62
CDC9P04819 UBC8YEL012W 657 nt4.94□□□□□ -1.62
CDC9P04819 tN(GUU)CtN(GUU)C 74 nt4.94□□□□□ -1.62
CDC9P04819 tN(GUU)FtN(GUU)F 74 nt4.94□□□□□ -1.62
CDC9P04819 tN(GUU)GtN(GUU)G 74 nt4.94□□□□□ -1.62
CDC9P04819 tN(GUU)KtN(GUU)K 74 nt4.94□□□□□ -1.62
CDC9P04819 tN(GUU)LtN(GUU)L 74 nt4.94□□□□□ -1.62
CDC9P04819 tN(GUU)N1tN(GUU)N1 74 nt4.94□□□□□ -1.62
CDC9P04819 tN(GUU)N2tN(GUU)N2 74 nt4.94□□□□□ -1.62
CDC9P04819 tN(GUU)O1tN(GUU)O1 74 nt4.94□□□□□ -1.62
Retrieved 100 of 7,029 protein–RNA pairs in 33.8 ms