Protein–RNA interactions for Protein: O95777

LSM8, U6 snRNA-associated Sm-like protein LSm8, humanhuman

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8O95777 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC23.35■■□□□ 1.33
LSM8O95777 AC087742.1-201ENST00000575880 1738 ntBASIC23.35■■□□□ 1.33
LSM8O95777 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
LSM8O95777 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
LSM8O95777 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
LSM8O95777 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
LSM8O95777 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
LSM8O95777 AC133637.1-201ENST00000624115 1537 ntBASIC23.34■■□□□ 1.33
LSM8O95777 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC23.34■■□□□ 1.33
LSM8O95777 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
LSM8O95777 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
LSM8O95777 LINC01960-201ENST00000563759 1884 ntBASIC23.34■■□□□ 1.33
LSM8O95777 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
LSM8O95777 GUSBP5-202ENST00000510805 1989 ntBASIC23.33■■□□□ 1.33
LSM8O95777 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
LSM8O95777 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
LSM8O95777 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.33■■□□□ 1.33
LSM8O95777 MIR3181-201ENST00000578512 73 ntBASIC23.33■■□□□ 1.33
LSM8O95777 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC23.33■■□□□ 1.33
LSM8O95777 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.32
LSM8O95777 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.32
LSM8O95777 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
LSM8O95777 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
LSM8O95777 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
LSM8O95777 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC23.32■■□□□ 1.32
LSM8O95777 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC23.32■■□□□ 1.32
LSM8O95777 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
LSM8O95777 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC23.32■■□□□ 1.32
LSM8O95777 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC23.32■■□□□ 1.32
LSM8O95777 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC23.32■■□□□ 1.32
LSM8O95777 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC23.32■■□□□ 1.32
LSM8O95777 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
LSM8O95777 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
LSM8O95777 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC23.32■■□□□ 1.32
LSM8O95777 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
LSM8O95777 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
LSM8O95777 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
LSM8O95777 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
LSM8O95777 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
LSM8O95777 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
LSM8O95777 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
LSM8O95777 DUX4L19-201ENST00000557448 1267 ntBASIC23.3■■□□□ 1.32
LSM8O95777 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC23.3■■□□□ 1.32
LSM8O95777 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
LSM8O95777 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
LSM8O95777 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
LSM8O95777 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
LSM8O95777 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
LSM8O95777 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC23.29■■□□□ 1.32
LSM8O95777 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC23.29■■□□□ 1.32
LSM8O95777 AL138724.1-201ENST00000606771 1088 ntBASIC23.29■■□□□ 1.32
LSM8O95777 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
LSM8O95777 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
LSM8O95777 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
LSM8O95777 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
LSM8O95777 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC23.28■■□□□ 1.32
LSM8O95777 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
LSM8O95777 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
LSM8O95777 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC23.28■■□□□ 1.32
LSM8O95777 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
LSM8O95777 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
LSM8O95777 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC23.28■■□□□ 1.32
LSM8O95777 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC23.28■■□□□ 1.32
LSM8O95777 TERT-206ENST00000508104 2486 ntTSL 5 BASIC23.28■■□□□ 1.32
LSM8O95777 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
LSM8O95777 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
LSM8O95777 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
LSM8O95777 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
LSM8O95777 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
LSM8O95777 ECEL1P1-201ENST00000373592 1742 ntBASIC23.28■■□□□ 1.32
LSM8O95777 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
LSM8O95777 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
LSM8O95777 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
LSM8O95777 AC242852.2-201ENST00000615738 1807 ntBASIC23.27■■□□□ 1.32
LSM8O95777 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC23.27■■□□□ 1.32
LSM8O95777 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
LSM8O95777 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC23.27■■□□□ 1.32
LSM8O95777 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
LSM8O95777 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
LSM8O95777 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
LSM8O95777 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC23.27■■□□□ 1.32
LSM8O95777 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
LSM8O95777 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC23.26■■□□□ 1.31
LSM8O95777 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
LSM8O95777 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
LSM8O95777 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
LSM8O95777 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
LSM8O95777 PTCHD3P2-201ENST00000424937 1205 ntBASIC23.26■■□□□ 1.31
LSM8O95777 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC23.26■■□□□ 1.31
LSM8O95777 AC131212.1-201ENST00000613771 668 ntBASIC23.26■■□□□ 1.31
LSM8O95777 SF1-220ENST00000626028 704 ntTSL 2 BASIC23.26■■□□□ 1.31
LSM8O95777 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
LSM8O95777 SYT6-210ENST00000641643 1587 ntBASIC23.26■■□□□ 1.31
LSM8O95777 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
LSM8O95777 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
LSM8O95777 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
LSM8O95777 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
LSM8O95777 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
LSM8O95777 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC23.25■■□□□ 1.31
LSM8O95777 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms