Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.94■■□□□ 1.1
PHGDHO43175 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
PHGDHO43175 Z92544.1-202ENST00000571933 1220 ntBASIC21.94■■□□□ 1.1
PHGDHO43175 MTDHP2-201ENST00000601468 714 ntBASIC21.94■■□□□ 1.1
PHGDHO43175 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.94■■□□□ 1.1
PHGDHO43175 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.94■■□□□ 1.1
PHGDHO43175 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PHGDHO43175 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PHGDHO43175 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.94■■□□□ 1.1
PHGDHO43175 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
PHGDHO43175 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.94■■□□□ 1.1
PHGDHO43175 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.94■■□□□ 1.1
PHGDHO43175 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PHGDHO43175 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PHGDHO43175 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
PHGDHO43175 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PHGDHO43175 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
PHGDHO43175 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.93■■□□□ 1.1
PHGDHO43175 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
PHGDHO43175 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.93■■□□□ 1.1
PHGDHO43175 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PHGDHO43175 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.93■■□□□ 1.1
PHGDHO43175 AC239859.2-201ENST00000444165 318 ntBASIC21.93■■□□□ 1.1
PHGDHO43175 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PHGDHO43175 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PHGDHO43175 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PHGDHO43175 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PHGDHO43175 FP325331.1-202ENST00000623531 1380 ntBASIC21.93■■□□□ 1.1
PHGDHO43175 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
PHGDHO43175 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PHGDHO43175 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PHGDHO43175 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
PHGDHO43175 AC009102.2-201ENST00000606772 1639 ntBASIC21.92■■□□□ 1.1
PHGDHO43175 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PHGDHO43175 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.92■■□□□ 1.1
PHGDHO43175 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.92■■□□□ 1.1
PHGDHO43175 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PHGDHO43175 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PHGDHO43175 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PHGDHO43175 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
PHGDHO43175 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
PHGDHO43175 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.91■■□□□ 1.1
PHGDHO43175 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PHGDHO43175 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PHGDHO43175 TSPY9P-201ENST00000440215 945 ntBASIC21.91■■□□□ 1.1
PHGDHO43175 TSPY11P-201ENST00000442607 1045 ntBASIC21.91■■□□□ 1.1
PHGDHO43175 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
PHGDHO43175 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
PHGDHO43175 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PHGDHO43175 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.91■■□□□ 1.1
PHGDHO43175 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
PHGDHO43175 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PHGDHO43175 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PHGDHO43175 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
PHGDHO43175 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
PHGDHO43175 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PHGDHO43175 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
PHGDHO43175 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.9■■□□□ 1.1
PHGDHO43175 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PHGDHO43175 AC009299.2-201ENST00000482477 511 ntBASIC21.9■■□□□ 1.1
PHGDHO43175 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.9■■□□□ 1.1
PHGDHO43175 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
PHGDHO43175 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
PHGDHO43175 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.9■■□□□ 1.1
PHGDHO43175 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
PHGDHO43175 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.9■■□□□ 1.1
PHGDHO43175 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.9■■□□□ 1.1
PHGDHO43175 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PHGDHO43175 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PHGDHO43175 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
PHGDHO43175 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
PHGDHO43175 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PHGDHO43175 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PHGDHO43175 DUX4L4-201ENST00000566884 1269 ntBASIC21.89■■□□□ 1.09
PHGDHO43175 AL451085.2-201ENST00000605085 799 ntBASIC21.89■■□□□ 1.09
PHGDHO43175 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PHGDHO43175 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PHGDHO43175 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.88■■□□□ 1.09
PHGDHO43175 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PHGDHO43175 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PHGDHO43175 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
PHGDHO43175 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.88■■□□□ 1.09
PHGDHO43175 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
PHGDHO43175 AC010997.5-201ENST00000609182 354 ntBASIC21.88■■□□□ 1.09
PHGDHO43175 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PHGDHO43175 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.88■■□□□ 1.09
PHGDHO43175 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.88■■□□□ 1.09
PHGDHO43175 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PHGDHO43175 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
PHGDHO43175 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PHGDHO43175 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.87■■□□□ 1.09
PHGDHO43175 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.87■■□□□ 1.09
PHGDHO43175 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PHGDHO43175 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PHGDHO43175 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
PHGDHO43175 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PHGDHO43175 AC092053.2-201ENST00000640557 1818 ntBASIC21.87■■□□□ 1.09
PHGDHO43175 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.87■■□□□ 1.09
PHGDHO43175 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PHGDHO43175 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms