Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.59■■□□□ 1.05
CDX4O14627 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDX4O14627 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.59■■□□□ 1.05
CDX4O14627 TSPY6P-201ENST00000448518 926 ntBASIC21.59■■□□□ 1.05
CDX4O14627 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.59■■□□□ 1.05
CDX4O14627 AC083906.2-201ENST00000511578 360 ntBASIC21.59■■□□□ 1.05
CDX4O14627 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.59■■□□□ 1.05
CDX4O14627 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.59■■□□□ 1.05
CDX4O14627 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDX4O14627 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CDX4O14627 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.59■■□□□ 1.05
CDX4O14627 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.58■■□□□ 1.05
CDX4O14627 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CDX4O14627 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.58■■□□□ 1.05
CDX4O14627 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.58■■□□□ 1.05
CDX4O14627 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CDX4O14627 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.58■■□□□ 1.05
CDX4O14627 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
CDX4O14627 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.57■■□□□ 1.04
CDX4O14627 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDX4O14627 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CDX4O14627 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CDX4O14627 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CDX4O14627 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CDX4O14627 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.57■■□□□ 1.04
CDX4O14627 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
CDX4O14627 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.57■■□□□ 1.04
CDX4O14627 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.57■■□□□ 1.04
CDX4O14627 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.57■■□□□ 1.04
CDX4O14627 MFSD11-216ENST00000590393 1141 ntBASIC21.57■■□□□ 1.04
CDX4O14627 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.57■■□□□ 1.04
CDX4O14627 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDX4O14627 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.57■■□□□ 1.04
CDX4O14627 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CDX4O14627 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.56■■□□□ 1.04
CDX4O14627 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
CDX4O14627 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDX4O14627 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDX4O14627 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDX4O14627 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
CDX4O14627 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
CDX4O14627 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.56■■□□□ 1.04
CDX4O14627 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.56■■□□□ 1.04
CDX4O14627 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.56■■□□□ 1.04
CDX4O14627 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
CDX4O14627 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDX4O14627 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CDX4O14627 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CDX4O14627 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
CDX4O14627 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
CDX4O14627 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CDX4O14627 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.55■■□□□ 1.04
CDX4O14627 GUSBP6-202ENST00000438529 1198 ntBASIC21.55■■□□□ 1.04
CDX4O14627 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
CDX4O14627 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.55■■□□□ 1.04
CDX4O14627 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDX4O14627 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDX4O14627 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
CDX4O14627 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CDX4O14627 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDX4O14627 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDX4O14627 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
CDX4O14627 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDX4O14627 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.54■■□□□ 1.04
CDX4O14627 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDX4O14627 SLC7A5P2-201ENST00000553010 536 ntBASIC21.54■■□□□ 1.04
CDX4O14627 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.54■■□□□ 1.04
CDX4O14627 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.54■■□□□ 1.04
CDX4O14627 MIR4651-201ENST00000582622 73 ntBASIC21.54■■□□□ 1.04
CDX4O14627 SMUG1P1-201ENST00000590640 811 ntBASIC21.54■■□□□ 1.04
CDX4O14627 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDX4O14627 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.54■■□□□ 1.04
CDX4O14627 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDX4O14627 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.54■■□□□ 1.04
CDX4O14627 AL121749.1-202ENST00000609313 2153 ntBASIC21.54■■□□□ 1.04
CDX4O14627 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDX4O14627 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDX4O14627 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDX4O14627 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CDX4O14627 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CDX4O14627 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.53■■□□□ 1.04
CDX4O14627 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.53■■□□□ 1.04
CDX4O14627 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.53■■□□□ 1.04
CDX4O14627 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC21.53■■□□□ 1.04
CDX4O14627 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.53■■□□□ 1.04
CDX4O14627 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.53■■□□□ 1.04
CDX4O14627 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.53■■□□□ 1.04
CDX4O14627 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.53■■□□□ 1.04
CDX4O14627 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDX4O14627 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
CDX4O14627 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CDX4O14627 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDX4O14627 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDX4O14627 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDX4O14627 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.52■■□□□ 1.04
CDX4O14627 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.52■■□□□ 1.04
CDX4O14627 AL138781.1-201ENST00000566567 1274 ntBASIC21.52■■□□□ 1.04
CDX4O14627 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.52■■□□□ 1.04
CDX4O14627 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.52■■□□□ 1.04
CDX4O14627 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms