Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC01548A6NM66 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC17.44■□□□□ 0.38
LINC01548A6NM66 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC17.44■□□□□ 0.38
LINC01548A6NM66 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
LINC01548A6NM66 SNX3-202ENST00000349379 890 ntTSL 2 BASIC17.44■□□□□ 0.38
LINC01548A6NM66 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC01548A6NM66 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC01548A6NM66 MIR939-201ENST00000401314 82 ntBASIC17.44■□□□□ 0.38
LINC01548A6NM66 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC01548A6NM66 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LINC01548A6NM66 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LINC01548A6NM66 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC01548A6NM66 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC01548A6NM66 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
LINC01548A6NM66 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
LINC01548A6NM66 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC01548A6NM66 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
LINC01548A6NM66 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LINC01548A6NM66 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC17.43■□□□□ 0.38
LINC01548A6NM66 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
LINC01548A6NM66 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
LINC01548A6NM66 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LINC01548A6NM66 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
LINC01548A6NM66 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LINC01548A6NM66 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
LINC01548A6NM66 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LINC01548A6NM66 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC17.43■□□□□ 0.38
LINC01548A6NM66 HYI-206ENST00000372434 1025 ntTSL 5 BASIC17.43■□□□□ 0.38
LINC01548A6NM66 AC099791.1-201ENST00000416440 715 ntBASIC17.43■□□□□ 0.38
LINC01548A6NM66 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC17.43■□□□□ 0.38
LINC01548A6NM66 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
LINC01548A6NM66 AC233992.3-201ENST00000607491 485 ntBASIC17.43■□□□□ 0.38
LINC01548A6NM66 AC019069.1-201ENST00000610008 1333 ntBASIC17.43■□□□□ 0.38
LINC01548A6NM66 STX4-202ENST00000394998 1498 ntTSL 2 BASIC17.43■□□□□ 0.38
LINC01548A6NM66 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LINC01548A6NM66 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC17.43■□□□□ 0.38
LINC01548A6NM66 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC17.42■□□□□ 0.38
LINC01548A6NM66 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC01548A6NM66 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC01548A6NM66 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
LINC01548A6NM66 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC17.42■□□□□ 0.38
LINC01548A6NM66 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC01548A6NM66 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC01548A6NM66 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC17.42■□□□□ 0.38
LINC01548A6NM66 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC01548A6NM66 BX842568.3-201ENST00000418104 571 ntBASIC17.42■□□□□ 0.38
LINC01548A6NM66 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC17.42■□□□□ 0.38
LINC01548A6NM66 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LINC01548A6NM66 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC17.42■□□□□ 0.38
LINC01548A6NM66 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC17.41■□□□□ 0.38
LINC01548A6NM66 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINC01548A6NM66 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
LINC01548A6NM66 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
LINC01548A6NM66 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC17.41■□□□□ 0.38
LINC01548A6NM66 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINC01548A6NM66 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINC01548A6NM66 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINC01548A6NM66 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
LINC01548A6NM66 STOX2-205ENST00000513034 807 ntTSL 3 BASIC17.41■□□□□ 0.38
LINC01548A6NM66 CA15P2-201ENST00000611168 834 ntBASIC17.41■□□□□ 0.38
LINC01548A6NM66 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LINC01548A6NM66 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINC01548A6NM66 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
LINC01548A6NM66 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LINC01548A6NM66 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC17.41■□□□□ 0.38
LINC01548A6NM66 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LINC01548A6NM66 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LINC01548A6NM66 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
LINC01548A6NM66 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
LINC01548A6NM66 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
LINC01548A6NM66 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LINC01548A6NM66 EBPL-204ENST00000378272 766 ntTSL 3 BASIC17.4■□□□□ 0.38
LINC01548A6NM66 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC17.4■□□□□ 0.38
LINC01548A6NM66 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC17.4■□□□□ 0.38
LINC01548A6NM66 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LINC01548A6NM66 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LINC01548A6NM66 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LINC01548A6NM66 RASA4CP-201ENST00000424092 1398 ntBASIC17.4■□□□□ 0.38
LINC01548A6NM66 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LINC01548A6NM66 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LINC01548A6NM66 COMT-203ENST00000403184 2217 ntTSL 2 BASIC17.39■□□□□ 0.37
LINC01548A6NM66 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC17.39■□□□□ 0.37
LINC01548A6NM66 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC17.39■□□□□ 0.37
LINC01548A6NM66 OR2I1P-207ENST00000453522 948 ntBASIC17.39■□□□□ 0.37
LINC01548A6NM66 AC027682.1-201ENST00000562846 899 ntBASIC17.39■□□□□ 0.37
LINC01548A6NM66 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LINC01548A6NM66 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
LINC01548A6NM66 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
LINC01548A6NM66 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LINC01548A6NM66 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LINC01548A6NM66 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LINC01548A6NM66 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
LINC01548A6NM66 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
LINC01548A6NM66 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LINC01548A6NM66 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC17.38■□□□□ 0.37
LINC01548A6NM66 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC17.38■□□□□ 0.37
LINC01548A6NM66 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
LINC01548A6NM66 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
LINC01548A6NM66 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
LINC01548A6NM66 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms