Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
TCRBV5S1A1TA0A578 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
TCRBV5S1A1TA0A578 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TCRBV5S1A1TA0A578 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TCRBV5S1A1TA0A578 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC23.18■■□□□ 1.3
TCRBV5S1A1TA0A578 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
TCRBV5S1A1TA0A578 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
TCRBV5S1A1TA0A578 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TCRBV5S1A1TA0A578 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC23.17■■□□□ 1.3
TCRBV5S1A1TA0A578 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
TCRBV5S1A1TA0A578 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC23.17■■□□□ 1.3
TCRBV5S1A1TA0A578 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
TCRBV5S1A1TA0A578 AC131281.2-201ENST00000520478 145 ntBASIC23.17■■□□□ 1.3
TCRBV5S1A1TA0A578 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.17■■□□□ 1.3
TCRBV5S1A1TA0A578 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TCRBV5S1A1TA0A578 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TCRBV5S1A1TA0A578 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TCRBV5S1A1TA0A578 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC23.17■■□□□ 1.3
TCRBV5S1A1TA0A578 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
TCRBV5S1A1TA0A578 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC23.17■■□□□ 1.3
TCRBV5S1A1TA0A578 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TCRBV5S1A1TA0A578 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TCRBV5S1A1TA0A578 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TCRBV5S1A1TA0A578 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC23.16■■□□□ 1.3
TCRBV5S1A1TA0A578 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC23.16■■□□□ 1.3
TCRBV5S1A1TA0A578 TRIR-202ENST00000588213 841 ntTSL 3 BASIC23.16■■□□□ 1.3
TCRBV5S1A1TA0A578 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
TCRBV5S1A1TA0A578 AC080038.3-201ENST00000623346 1952 ntBASIC23.16■■□□□ 1.3
TCRBV5S1A1TA0A578 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
TCRBV5S1A1TA0A578 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TCRBV5S1A1TA0A578 AC139530.1-201ENST00000575312 1977 ntBASIC23.15■■□□□ 1.3
TCRBV5S1A1TA0A578 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC23.15■■□□□ 1.3
TCRBV5S1A1TA0A578 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC23.15■■□□□ 1.3
TCRBV5S1A1TA0A578 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TCRBV5S1A1TA0A578 LINC01960-201ENST00000563759 1884 ntBASIC23.15■■□□□ 1.3
TCRBV5S1A1TA0A578 AC242852.2-201ENST00000615738 1807 ntBASIC23.15■■□□□ 1.3
TCRBV5S1A1TA0A578 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TCRBV5S1A1TA0A578 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC23.14■■□□□ 1.3
TCRBV5S1A1TA0A578 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC23.14■■□□□ 1.3
TCRBV5S1A1TA0A578 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC23.14■■□□□ 1.3
TCRBV5S1A1TA0A578 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
TCRBV5S1A1TA0A578 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TCRBV5S1A1TA0A578 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC23.14■■□□□ 1.29
TCRBV5S1A1TA0A578 SRD5A1P1-201ENST00000442297 786 ntBASIC23.14■■□□□ 1.29
TCRBV5S1A1TA0A578 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.14■■□□□ 1.29
TCRBV5S1A1TA0A578 pRNA.6-201ENST00000610482 90 ntBASIC23.14■■□□□ 1.29
TCRBV5S1A1TA0A578 pRNA.5-201ENST00000612139 90 ntBASIC23.14■■□□□ 1.29
TCRBV5S1A1TA0A578 pRNA.11-201ENST00000618423 90 ntBASIC23.14■■□□□ 1.29
TCRBV5S1A1TA0A578 pRNA.13-201ENST00000619112 90 ntBASIC23.14■■□□□ 1.29
TCRBV5S1A1TA0A578 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TCRBV5S1A1TA0A578 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.29
TCRBV5S1A1TA0A578 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
TCRBV5S1A1TA0A578 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TCRBV5S1A1TA0A578 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC23.14■■□□□ 1.29
TCRBV5S1A1TA0A578 AC133637.1-201ENST00000624115 1537 ntBASIC23.13■■□□□ 1.29
TCRBV5S1A1TA0A578 LINC00526-201ENST00000581067 1875 ntBASIC23.13■■□□□ 1.29
TCRBV5S1A1TA0A578 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC23.13■■□□□ 1.29
TCRBV5S1A1TA0A578 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
TCRBV5S1A1TA0A578 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC23.13■■□□□ 1.29
TCRBV5S1A1TA0A578 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
TCRBV5S1A1TA0A578 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC23.13■■□□□ 1.29
TCRBV5S1A1TA0A578 MIR3181-201ENST00000578512 73 ntBASIC23.13■■□□□ 1.29
TCRBV5S1A1TA0A578 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC23.13■■□□□ 1.29
TCRBV5S1A1TA0A578 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TCRBV5S1A1TA0A578 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TCRBV5S1A1TA0A578 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
TCRBV5S1A1TA0A578 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TCRBV5S1A1TA0A578 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC23.13■■□□□ 1.29
TCRBV5S1A1TA0A578 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
TCRBV5S1A1TA0A578 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TCRBV5S1A1TA0A578 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC23.12■■□□□ 1.29
TCRBV5S1A1TA0A578 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TCRBV5S1A1TA0A578 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC23.12■■□□□ 1.29
TCRBV5S1A1TA0A578 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
TCRBV5S1A1TA0A578 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC23.12■■□□□ 1.29
TCRBV5S1A1TA0A578 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TCRBV5S1A1TA0A578 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC23.12■■□□□ 1.29
TCRBV5S1A1TA0A578 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC23.12■■□□□ 1.29
TCRBV5S1A1TA0A578 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
TCRBV5S1A1TA0A578 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC23.12■■□□□ 1.29
TCRBV5S1A1TA0A578 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TCRBV5S1A1TA0A578 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TCRBV5S1A1TA0A578 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TCRBV5S1A1TA0A578 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
TCRBV5S1A1TA0A578 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC23.11■■□□□ 1.29
TCRBV5S1A1TA0A578 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TCRBV5S1A1TA0A578 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.11■■□□□ 1.29
TCRBV5S1A1TA0A578 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
TCRBV5S1A1TA0A578 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
TCRBV5S1A1TA0A578 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
TCRBV5S1A1TA0A578 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC23.11■■□□□ 1.29
TCRBV5S1A1TA0A578 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
TCRBV5S1A1TA0A578 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TCRBV5S1A1TA0A578 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TCRBV5S1A1TA0A578 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TCRBV5S1A1TA0A578 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
TCRBV5S1A1TA0A578 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
TCRBV5S1A1TA0A578 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC23.1■■□□□ 1.29
TCRBV5S1A1TA0A578 CA15P2-201ENST00000611168 834 ntBASIC23.1■■□□□ 1.29
TCRBV5S1A1TA0A578 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms