Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TCRBV9S1A1TA0A576 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
TCRBV9S1A1TA0A576 AC021242.3-201ENST00000607598 1377 ntBASIC22.25■■□□□ 1.15
TCRBV9S1A1TA0A576 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TCRBV9S1A1TA0A576 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
TCRBV9S1A1TA0A576 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
TCRBV9S1A1TA0A576 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TCRBV9S1A1TA0A576 ASB1-202ENST00000409297 878 ntTSL 5 BASIC22.24■■□□□ 1.15
TCRBV9S1A1TA0A576 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC22.24■■□□□ 1.15
TCRBV9S1A1TA0A576 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC22.24■■□□□ 1.15
TCRBV9S1A1TA0A576 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
TCRBV9S1A1TA0A576 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TCRBV9S1A1TA0A576 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
TCRBV9S1A1TA0A576 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TCRBV9S1A1TA0A576 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
TCRBV9S1A1TA0A576 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
TCRBV9S1A1TA0A576 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TCRBV9S1A1TA0A576 FBXW4P1-201ENST00000426721 2239 ntBASIC22.23■■□□□ 1.15
TCRBV9S1A1TA0A576 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC22.23■■□□□ 1.15
TCRBV9S1A1TA0A576 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TCRBV9S1A1TA0A576 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC22.23■■□□□ 1.15
TCRBV9S1A1TA0A576 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TCRBV9S1A1TA0A576 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
TCRBV9S1A1TA0A576 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TCRBV9S1A1TA0A576 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TCRBV9S1A1TA0A576 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TCRBV9S1A1TA0A576 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TCRBV9S1A1TA0A576 USP48-205ENST00000421625 2818 ntTSL 2 BASIC22.22■■□□□ 1.15
TCRBV9S1A1TA0A576 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TCRBV9S1A1TA0A576 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
TCRBV9S1A1TA0A576 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC22.22■■□□□ 1.15
TCRBV9S1A1TA0A576 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC22.22■■□□□ 1.15
TCRBV9S1A1TA0A576 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
TCRBV9S1A1TA0A576 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
TCRBV9S1A1TA0A576 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TCRBV9S1A1TA0A576 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TCRBV9S1A1TA0A576 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TCRBV9S1A1TA0A576 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC22.21■■□□□ 1.15
TCRBV9S1A1TA0A576 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC22.21■■□□□ 1.15
TCRBV9S1A1TA0A576 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
TCRBV9S1A1TA0A576 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TCRBV9S1A1TA0A576 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
TCRBV9S1A1TA0A576 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC22.21■■□□□ 1.15
TCRBV9S1A1TA0A576 CLTA-206ENST00000466396 695 ntTSL 2 BASIC22.21■■□□□ 1.15
TCRBV9S1A1TA0A576 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TCRBV9S1A1TA0A576 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TCRBV9S1A1TA0A576 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
TCRBV9S1A1TA0A576 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
TCRBV9S1A1TA0A576 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
TCRBV9S1A1TA0A576 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC22.21■■□□□ 1.15
TCRBV9S1A1TA0A576 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC22.21■■□□□ 1.15
TCRBV9S1A1TA0A576 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
TCRBV9S1A1TA0A576 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC22.21■■□□□ 1.15
TCRBV9S1A1TA0A576 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC22.21■■□□□ 1.15
TCRBV9S1A1TA0A576 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC22.21■■□□□ 1.15
TCRBV9S1A1TA0A576 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
TCRBV9S1A1TA0A576 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
TCRBV9S1A1TA0A576 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
TCRBV9S1A1TA0A576 LINC01960-201ENST00000563759 1884 ntBASIC22.2■■□□□ 1.14
TCRBV9S1A1TA0A576 AL137060.1-201ENST00000618151 2648 ntBASIC22.2■■□□□ 1.14
TCRBV9S1A1TA0A576 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TCRBV9S1A1TA0A576 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
TCRBV9S1A1TA0A576 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC22.2■■□□□ 1.14
TCRBV9S1A1TA0A576 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
TCRBV9S1A1TA0A576 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TCRBV9S1A1TA0A576 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
TCRBV9S1A1TA0A576 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
TCRBV9S1A1TA0A576 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
TCRBV9S1A1TA0A576 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TCRBV9S1A1TA0A576 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
TCRBV9S1A1TA0A576 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
TCRBV9S1A1TA0A576 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
TCRBV9S1A1TA0A576 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
TCRBV9S1A1TA0A576 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
TCRBV9S1A1TA0A576 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
TCRBV9S1A1TA0A576 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC22.18■■□□□ 1.14
TCRBV9S1A1TA0A576 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
TCRBV9S1A1TA0A576 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
TCRBV9S1A1TA0A576 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
TCRBV9S1A1TA0A576 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
TCRBV9S1A1TA0A576 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TCRBV9S1A1TA0A576 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC22.18■■□□□ 1.14
TCRBV9S1A1TA0A576 DUX4L4-201ENST00000566884 1269 ntBASIC22.18■■□□□ 1.14
TCRBV9S1A1TA0A576 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TCRBV9S1A1TA0A576 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
TCRBV9S1A1TA0A576 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC22.18■■□□□ 1.14
TCRBV9S1A1TA0A576 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
TCRBV9S1A1TA0A576 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TCRBV9S1A1TA0A576 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC22.17■■□□□ 1.14
TCRBV9S1A1TA0A576 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
TCRBV9S1A1TA0A576 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC22.17■■□□□ 1.14
TCRBV9S1A1TA0A576 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC22.17■■□□□ 1.14
TCRBV9S1A1TA0A576 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
TCRBV9S1A1TA0A576 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC22.17■■□□□ 1.14
TCRBV9S1A1TA0A576 AC009086.3-201ENST00000623486 1008 ntBASIC22.17■■□□□ 1.14
TCRBV9S1A1TA0A576 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC22.17■■□□□ 1.14
TCRBV9S1A1TA0A576 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TCRBV9S1A1TA0A576 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
TCRBV9S1A1TA0A576 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC22.16■■□□□ 1.14
TCRBV9S1A1TA0A576 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC22.16■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms