Protein–RNA interactions for Protein: A0A075B6N1

TRBV19, T-cell receptor beta variable 19 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV19A0A075B6N1 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV19A0A075B6N1 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV19A0A075B6N1 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
TRBV19A0A075B6N1 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TRBV19A0A075B6N1 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC16.82■□□□□ 0.28
TRBV19A0A075B6N1 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV19A0A075B6N1 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV19A0A075B6N1 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV19A0A075B6N1 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV19A0A075B6N1 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV19A0A075B6N1 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV19A0A075B6N1 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
TRBV19A0A075B6N1 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV19A0A075B6N1 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV19A0A075B6N1 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC16.82■□□□□ 0.28
TRBV19A0A075B6N1 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV19A0A075B6N1 USP48-205ENST00000421625 2818 ntTSL 2 BASIC16.82■□□□□ 0.28
TRBV19A0A075B6N1 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV19A0A075B6N1 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV19A0A075B6N1 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV19A0A075B6N1 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV19A0A075B6N1 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV19A0A075B6N1 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV19A0A075B6N1 FP325331.1-202ENST00000623531 1380 ntBASIC16.81■□□□□ 0.28
TRBV19A0A075B6N1 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV19A0A075B6N1 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV19A0A075B6N1 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV19A0A075B6N1 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
TRBV19A0A075B6N1 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC16.81■□□□□ 0.28
TRBV19A0A075B6N1 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC16.81■□□□□ 0.28
TRBV19A0A075B6N1 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TRBV19A0A075B6N1 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
TRBV19A0A075B6N1 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC16.81■□□□□ 0.28
TRBV19A0A075B6N1 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV19A0A075B6N1 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV19A0A075B6N1 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV19A0A075B6N1 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV19A0A075B6N1 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV19A0A075B6N1 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC16.8■□□□□ 0.28
TRBV19A0A075B6N1 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV19A0A075B6N1 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV19A0A075B6N1 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
TRBV19A0A075B6N1 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV19A0A075B6N1 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV19A0A075B6N1 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV19A0A075B6N1 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
TRBV19A0A075B6N1 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV19A0A075B6N1 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV19A0A075B6N1 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV19A0A075B6N1 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV19A0A075B6N1 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TRBV19A0A075B6N1 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV19A0A075B6N1 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV19A0A075B6N1 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC16.79■□□□□ 0.28
TRBV19A0A075B6N1 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
TRBV19A0A075B6N1 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV19A0A075B6N1 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV19A0A075B6N1 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV19A0A075B6N1 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV19A0A075B6N1 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV19A0A075B6N1 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC16.79■□□□□ 0.28
TRBV19A0A075B6N1 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC16.79■□□□□ 0.28
TRBV19A0A075B6N1 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV19A0A075B6N1 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC16.79■□□□□ 0.28
TRBV19A0A075B6N1 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV19A0A075B6N1 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
TRBV19A0A075B6N1 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV19A0A075B6N1 AC005703.6-201ENST00000623265 1329 ntBASIC16.78■□□□□ 0.28
TRBV19A0A075B6N1 AL137060.1-201ENST00000618151 2648 ntBASIC16.78■□□□□ 0.28
TRBV19A0A075B6N1 GUK1-208ENST00000366728 842 ntTSL 2 BASIC16.78■□□□□ 0.28
TRBV19A0A075B6N1 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV19A0A075B6N1 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
TRBV19A0A075B6N1 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
TRBV19A0A075B6N1 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV19A0A075B6N1 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC16.78■□□□□ 0.28
TRBV19A0A075B6N1 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV19A0A075B6N1 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
TRBV19A0A075B6N1 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRBV19A0A075B6N1 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC16.77■□□□□ 0.28
TRBV19A0A075B6N1 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRBV19A0A075B6N1 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRBV19A0A075B6N1 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRBV19A0A075B6N1 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC16.77■□□□□ 0.28
TRBV19A0A075B6N1 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRBV19A0A075B6N1 AC137630.3-201ENST00000607245 391 ntBASIC16.77■□□□□ 0.28
TRBV19A0A075B6N1 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC16.77■□□□□ 0.28
TRBV19A0A075B6N1 AC009086.3-201ENST00000623486 1008 ntBASIC16.77■□□□□ 0.28
TRBV19A0A075B6N1 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
TRBV19A0A075B6N1 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRBV19A0A075B6N1 LINC01960-201ENST00000563759 1884 ntBASIC16.77■□□□□ 0.27
TRBV19A0A075B6N1 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC16.77■□□□□ 0.27
TRBV19A0A075B6N1 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRBV19A0A075B6N1 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
TRBV19A0A075B6N1 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC16.76■□□□□ 0.27
TRBV19A0A075B6N1 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
TRBV19A0A075B6N1 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
TRBV19A0A075B6N1 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV19A0A075B6N1 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV19A0A075B6N1 SENP5-202ENST00000419026 973 ntTSL 3 BASIC16.76■□□□□ 0.27
TRBV19A0A075B6N1 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms