Protein–RNA interactions for Protein: P30260

CDC27, Cell division cycle protein 27 homolog, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27P30260 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDC27P30260 AHCYP7-201ENST00000560847 1308 ntBASIC15.32■□□□□ 0.04
CDC27P30260 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDC27P30260 ITGAL-203ENST00000433423 1416 ntTSL 2 BASIC15.32■□□□□ 0.04
CDC27P30260 KRT42P-201ENST00000398469 2864 ntTSL 2 BASIC15.32■□□□□ 0.04
CDC27P30260 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDC27P30260 EPB41L2-205ENST00000445890 3677 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CDC27P30260 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDC27P30260 CREB5-204ENST00000396300 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDC27P30260 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDC27P30260 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC15.32■□□□□ 0.04
CDC27P30260 ELOVL1-216ENST00000621943 1625 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CDC27P30260 ENTPD3-203ENST00000445129 1658 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDC27P30260 PIGB-202ENST00000539642 1668 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CDC27P30260 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDC27P30260 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDC27P30260 GALT-201ENST00000378842 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDC27P30260 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDC27P30260 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDC27P30260 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDC27P30260 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDC27P30260 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDC27P30260 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC15.31■□□□□ 0.04
CDC27P30260 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDC27P30260 SCGB1C1-201ENST00000342878 431 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDC27P30260 PIFO-201ENST00000369737 746 ntTSL 2 BASIC15.31■□□□□ 0.04
CDC27P30260 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC15.31■□□□□ 0.04
CDC27P30260 BCAS2P2-201ENST00000425064 674 ntBASIC15.31■□□□□ 0.04
CDC27P30260 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC15.31■□□□□ 0.04
CDC27P30260 TONSL-AS1-201ENST00000442850 428 ntTSL 5 BASIC15.31■□□□□ 0.04
CDC27P30260 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC15.31■□□□□ 0.04
CDC27P30260 KIAA1191-210ENST00000510164 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDC27P30260 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDC27P30260 AC109597.2-201ENST00000569407 927 ntTSL 3 BASIC15.31■□□□□ 0.04
CDC27P30260 AC090282.1-201ENST00000572821 534 ntTSL 3 BASIC15.31■□□□□ 0.04
CDC27P30260 AC025048.4-201ENST00000589740 699 ntTSL 3 BASIC15.31■□□□□ 0.04
CDC27P30260 AC021146.12-201ENST00000608365 477 ntTSL 2 BASIC15.31■□□□□ 0.04
CDC27P30260 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC15.31■□□□□ 0.04
CDC27P30260 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDC27P30260 TTN-AS1-264ENST00000627564 1319 ntTSL 5 BASIC15.31■□□□□ 0.04
CDC27P30260 RNF113A-201ENST00000371442 1353 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
CDC27P30260 LINC02433-202ENST00000507108 1395 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDC27P30260 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC15.31■□□□□ 0.04
CDC27P30260 ACTN1-202ENST00000376839 2824 ntTSL 2 BASIC15.31■□□□□ 0.04
CDC27P30260 TRIM80P-201ENST00000455685 2848 ntBASIC15.31■□□□□ 0.04
CDC27P30260 IL1R2-202ENST00000393414 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDC27P30260 FAM131B-204ENST00000409578 4286 ntTSL 5 BASIC15.31■□□□□ 0.04
CDC27P30260 ZNF215-207ENST00000610573 1503 ntTSL 5 BASIC15.31■□□□□ 0.04
CDC27P30260 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
CDC27P30260 CNOT4-204ENST00000414802 1687 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDC27P30260 A1BG-AS1-203ENST00000594950 1718 ntTSL 2 BASIC15.31■□□□□ 0.04
CDC27P30260 JAML-202ENST00000356289 1944 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDC27P30260 GAS6-AS2-201ENST00000608651 1952 ntTSL 2 BASIC15.31■□□□□ 0.04
CDC27P30260 TSFM-204ENST00000454289 2192 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDC27P30260 MPP4-203ENST00000396886 2250 ntTSL 2 BASIC15.31■□□□□ 0.04
CDC27P30260 TRPC3-205ENST00000513531 2382 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDC27P30260 ALOX5-201ENST00000374391 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDC27P30260 AC015819.3-201ENST00000624305 2674 ntBASIC15.3■□□□□ 0.04
CDC27P30260 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDC27P30260 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDC27P30260 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC15.3■□□□□ 0.04
CDC27P30260 EPHA1-201ENST00000275815 3363 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDC27P30260 MFSD11-201ENST00000336509 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDC27P30260 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC15.3■□□□□ 0.04
CDC27P30260 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDC27P30260 A1CF-204ENST00000373997 2116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDC27P30260 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDC27P30260 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDC27P30260 FMO1-203ENST00000402921 2003 ntTSL 2 BASIC15.3■□□□□ 0.04
CDC27P30260 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC15.3■□□□□ 0.04
CDC27P30260 AC009501.1-201ENST00000429952 2069 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDC27P30260 AL118511.1-201ENST00000439341 794 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDC27P30260 HIST1H2APS2-201ENST00000454426 370 ntBASIC15.3■□□□□ 0.04
CDC27P30260 AC025594.1-201ENST00000469533 543 ntBASIC15.3■□□□□ 0.04
CDC27P30260 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDC27P30260 BCL2L12P1-201ENST00000508390 733 ntBASIC15.3■□□□□ 0.04
CDC27P30260 COPS5-203ENST00000517736 1621 ntTSL 5 BASIC15.3■□□□□ 0.04
CDC27P30260 NDRG1-222ENST00000522476 1385 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDC27P30260 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDC27P30260 TXNRD1-214ENST00000526691 3974 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDC27P30260 TCP1-215ENST00000544255 1403 ntTSL 5 BASIC15.3■□□□□ 0.04
CDC27P30260 TLE3-220ENST00000559929 3408 ntTSL 5 BASIC15.3■□□□□ 0.04
CDC27P30260 AC023968.2-201ENST00000560593 1049 ntBASIC15.3■□□□□ 0.04
CDC27P30260 GRAPL-204ENST00000577213 866 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CDC27P30260 SEPT4-AS1-203ENST00000580769 1000 ntTSL 3 BASIC15.3■□□□□ 0.04
CDC27P30260 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC15.3■□□□□ 0.04
CDC27P30260 TMUB2-214ENST00000590235 1569 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDC27P30260 CLPP-205ENST00000596605 646 ntTSL 2 BASIC15.3■□□□□ 0.04
CDC27P30260 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC15.3■□□□□ 0.04
CDC27P30260 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC15.3■□□□□ 0.04
CDC27P30260 AC073592.2-201ENST00000623062 780 ntBASIC15.3■□□□□ 0.04
CDC27P30260 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC15.3■□□□□ 0.04
CDC27P30260 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDC27P30260 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CDC27P30260 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CDC27P30260 TRIM32-203ENST00000450136 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDC27P30260 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CDC27P30260 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDC27P30260 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDC27P30260 DMBT1P1-203ENST00000636837 4628 ntBASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms