Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 GGTLC4P-201ENST00000402176 664 ntBASIC14.95□□□□□ -0.02
TPM3P06753 SMARCB1-203ENST00000407082 1182 ntTSL 5 BASIC14.95□□□□□ -0.02
TPM3P06753 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14.95□□□□□ -0.02
TPM3P06753 PTPA-218ENST00000435132 618 ntTSL 2 BASIC14.95□□□□□ -0.02
TPM3P06753 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC14.95□□□□□ -0.02
TPM3P06753 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC14.95□□□□□ -0.02
TPM3P06753 NPIPP1-202ENST00000534799 1214 ntTSL 3 BASIC14.95□□□□□ -0.02
TPM3P06753 RAB43P1-201ENST00000561790 589 ntBASIC14.95□□□□□ -0.02
TPM3P06753 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC14.95□□□□□ -0.02
TPM3P06753 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
TPM3P06753 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC14.95□□□□□ -0.02
TPM3P06753 AL512343.1-201ENST00000605837 169 ntBASIC14.95□□□□□ -0.02
TPM3P06753 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC14.95□□□□□ -0.02
TPM3P06753 AL162274.1-201ENST00000617191 1098 ntBASIC14.95□□□□□ -0.02
TPM3P06753 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC14.95□□□□□ -0.02
TPM3P06753 CSF3R-204ENST00000373104 2953 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TPM3P06753 GFI1B-202ENST00000372122 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TPM3P06753 TBC1D3I-203ENST00000621034 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TPM3P06753 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TPM3P06753 ADAM19-201ENST00000257527 6481 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TPM3P06753 RGS3-204ENST00000350696 4387 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
TPM3P06753 NUP62-208ENST00000596217 3590 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
TPM3P06753 HNRNPL-210ENST00000600873 1633 ntTSL 5 BASIC14.95□□□□□ -0.02
TPM3P06753 WDR27-203ENST00000448612 3178 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
TPM3P06753 NDUFAF6-201ENST00000396111 1869 ntTSL 5 BASIC14.95□□□□□ -0.02
TPM3P06753 ETFBKMT-205ENST00000538463 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TPM3P06753 AC112176.1-201ENST00000565428 3024 ntBASIC14.95□□□□□ -0.02
TPM3P06753 AC018645.3-201ENST00000628855 2646 ntBASIC14.95□□□□□ -0.02
TPM3P06753 PXMP4-203ENST00000409299 5684 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TPM3P06753 TEF-202ENST00000406644 4386 ntTSL 2 BASIC14.94□□□□□ -0.02
TPM3P06753 CMC2-201ENST00000219400 10301 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TPM3P06753 TP73-206ENST00000378288 5120 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TPM3P06753 PI4KAP2-211ENST00000486209 3213 ntTSL 5 BASIC14.94□□□□□ -0.02
TPM3P06753 TMUB2-203ENST00000446571 1580 ntTSL 2 BASIC14.94□□□□□ -0.02
TPM3P06753 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
TPM3P06753 SPRED2-201ENST00000356388 4097 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TPM3P06753 MVP-202ENST00000395353 2925 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
TPM3P06753 NRF1-201ENST00000223190 2424 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
TPM3P06753 ANKZF1-202ENST00000409849 2155 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TPM3P06753 ST5-201ENST00000313726 4507 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
TPM3P06753 PEX5-201ENST00000266563 3252 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TPM3P06753 ALDH1L1-202ENST00000393431 2797 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TPM3P06753 LITAF-203ENST00000413364 2292 ntTSL 2 BASIC14.94□□□□□ -0.02
TPM3P06753 IPO7-201ENST00000379719 6191 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TPM3P06753 IMPDH1P8-201ENST00000413639 1525 ntBASIC14.94□□□□□ -0.02
TPM3P06753 JAML-211ENST00000533261 1508 ntTSL 5 BASIC14.94□□□□□ -0.02
TPM3P06753 APEH-201ENST00000296456 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TPM3P06753 EPB41L5-201ENST00000263713 6628 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TPM3P06753 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
TPM3P06753 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC14.94□□□□□ -0.02
TPM3P06753 CSH2-202ENST00000345366 598 ntTSL 5 BASIC14.94□□□□□ -0.02
TPM3P06753 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
TPM3P06753 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TPM3P06753 PUDP-201ENST00000381077 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TPM3P06753 MRPL36-201ENST00000382647 587 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
TPM3P06753 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
TPM3P06753 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TPM3P06753 STX1A-203ENST00000395155 783 ntTSL 2 BASIC14.94□□□□□ -0.02
TPM3P06753 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.94□□□□□ -0.02
TPM3P06753 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC14.94□□□□□ -0.02
TPM3P06753 APOA2-204ENST00000464492 530 ntTSL 3 BASIC14.94□□□□□ -0.02
TPM3P06753 MARK2P5-201ENST00000507649 634 ntBASIC14.94□□□□□ -0.02
TPM3P06753 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TPM3P06753 CSH2-206ENST00000560142 749 ntTSL 5 BASIC14.94□□□□□ -0.02
TPM3P06753 AL049840.2-201ENST00000602722 535 ntBASIC14.94□□□□□ -0.02
TPM3P06753 Z82244.1-201ENST00000631502 840 ntBASIC14.94□□□□□ -0.02
TPM3P06753 NWD1-206ENST00000552788 6964 ntAPPRIS P5 TSL 5 BASIC14.94□□□□□ -0.02
TPM3P06753 LRRC8E-201ENST00000306708 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TPM3P06753 MFAP4-201ENST00000299610 1873 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
TPM3P06753 MFAP4-203ENST00000497081 1876 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TPM3P06753 AC010997.4-201ENST00000609200 1890 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TPM3P06753 EMB-201ENST00000303221 4281 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TPM3P06753 DPAGT1-201ENST00000354202 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TPM3P06753 RNF113A-201ENST00000371442 1353 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
TPM3P06753 AC090502.4-201ENST00000551714 1386 ntBASIC14.94□□□□□ -0.02
TPM3P06753 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC14.94□□□□□ -0.02
TPM3P06753 ATP8A1-202ENST00000381668 8270 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TPM3P06753 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TPM3P06753 E2F3-203ENST00000613242 4094 ntTSL 5 BASIC14.94□□□□□ -0.02
TPM3P06753 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC14.94□□□□□ -0.02
TPM3P06753 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TPM3P06753 IL1R2-201ENST00000332549 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TPM3P06753 RASAL2-201ENST00000367649 4378 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
TPM3P06753 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TPM3P06753 AMBRA1-212ENST00000534300 5067 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TPM3P06753 RGPD8-203ENST00000409750 5544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TPM3P06753 PFKFB3-203ENST00000379775 4483 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TPM3P06753 CREBL2-201ENST00000228865 3754 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TPM3P06753 TRIM31-210ENST00000376734 2043 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
TPM3P06753 PPP1CB-201ENST00000296122 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TPM3P06753 P3H2-201ENST00000319332 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TPM3P06753 ANKRD34A-201ENST00000606888 3613 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
TPM3P06753 PCDHGA6-201ENST00000517434 4775 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TPM3P06753 AMACR-201ENST00000335606 4153 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TPM3P06753 LEPROT-201ENST00000371065 4622 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TPM3P06753 TOP3B-202ENST00000398793 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TPM3P06753 SLC28A1-203ENST00000394573 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TPM3P06753 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TPM3P06753 KRT42P-202ENST00000438131 2895 ntTSL 2 BASIC14.93□□□□□ -0.02
TPM3P06753 IGSF9-201ENST00000361509 3996 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms