Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 GBP1P1-201ENST00000394662 1740 ntBASIC11.87□□□□□ -0.51
APOC1P02654 TREH-202ENST00000397925 1718 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
APOC1P02654 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
APOC1P02654 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
APOC1P02654 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
APOC1P02654 MYH11-202ENST00000396324 6847 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
APOC1P02654 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
APOC1P02654 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
APOC1P02654 LMO1-201ENST00000335790 1279 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
APOC1P02654 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
APOC1P02654 RPL8P2-201ENST00000430538 502 ntBASIC11.87□□□□□ -0.51
APOC1P02654 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC11.87□□□□□ -0.51
APOC1P02654 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC11.87□□□□□ -0.51
APOC1P02654 AC005077.2-201ENST00000449786 690 ntBASIC11.87□□□□□ -0.51
APOC1P02654 AC095040.1-201ENST00000513286 675 ntBASIC11.87□□□□□ -0.51
APOC1P02654 LMO1-204ENST00000534484 770 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
APOC1P02654 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC11.87□□□□□ -0.51
APOC1P02654 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC11.87□□□□□ -0.51
APOC1P02654 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC11.87□□□□□ -0.51
APOC1P02654 KRT8P2-201ENST00000556193 944 ntBASIC11.87□□□□□ -0.51
APOC1P02654 AC091769.1-201ENST00000619576 568 ntBASIC11.87□□□□□ -0.51
APOC1P02654 BEST1-208ENST00000534553 1829 ntTSL 2 BASIC11.87□□□□□ -0.51
APOC1P02654 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
APOC1P02654 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
APOC1P02654 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
APOC1P02654 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC11.87□□□□□ -0.51
APOC1P02654 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC11.87□□□□□ -0.51
APOC1P02654 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
APOC1P02654 TENM3-204ENST00000511685 10896 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
APOC1P02654 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
APOC1P02654 PTCH1-209ENST00000437951 8049 ntTSL 5 BASIC11.87□□□□□ -0.51
APOC1P02654 NPHS1-202ENST00000378910 4276 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
APOC1P02654 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
APOC1P02654 PAX8-202ENST00000263335 3735 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
APOC1P02654 GPR176-201ENST00000299092 3844 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
APOC1P02654 GFI1B-202ENST00000372122 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
APOC1P02654 KCNAB2-206ENST00000378097 4201 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
APOC1P02654 NSD2-205ENST00000382892 7706 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
APOC1P02654 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
APOC1P02654 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
APOC1P02654 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
APOC1P02654 GOLGA4-202ENST00000361924 7772 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
APOC1P02654 CCDC114-201ENST00000315396 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
APOC1P02654 ENOX2-204ENST00000394363 4174 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
APOC1P02654 ZDHHC7-201ENST00000313732 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
APOC1P02654 AC073335.2-201ENST00000610177 3441 ntBASIC11.86□□□□□ -0.51
APOC1P02654 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
APOC1P02654 DNAJC30-201ENST00000395176 2485 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
APOC1P02654 IP6K1-201ENST00000321599 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
APOC1P02654 ALKBH1-201ENST00000216489 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
APOC1P02654 OR2B11-202ENST00000641149 6414 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
APOC1P02654 IFNLR1-201ENST00000327535 4549 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
APOC1P02654 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
APOC1P02654 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
APOC1P02654 NPR2-201ENST00000342694 3686 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
APOC1P02654 FER1L6-AS1-201ENST00000518567 2315 ntTSL 2 BASIC11.86□□□□□ -0.51
APOC1P02654 SYNPO-202ENST00000394243 7063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
APOC1P02654 AC022364.1-202ENST00000617468 2409 ntBASIC11.86□□□□□ -0.51
APOC1P02654 DDX12P-201ENST00000432996 2947 ntBASIC11.86□□□□□ -0.51
APOC1P02654 EHD1-213ENST00000621096 3336 ntTSL 5 BASIC11.86□□□□□ -0.51
APOC1P02654 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
APOC1P02654 EPB41L1-212ENST00000441639 5967 ntTSL 5 BASIC11.86□□□□□ -0.51
APOC1P02654 TPI1P3-201ENST00000335020 740 ntBASIC11.86□□□□□ -0.51
APOC1P02654 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC11.86□□□□□ -0.51
APOC1P02654 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC11.86□□□□□ -0.51
APOC1P02654 AC079250.1-201ENST00000456046 531 ntBASIC11.86□□□□□ -0.51
APOC1P02654 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC11.86□□□□□ -0.51
APOC1P02654 RPL18AP3-201ENST00000462885 528 ntBASIC11.86□□□□□ -0.51
APOC1P02654 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC11.86□□□□□ -0.51
APOC1P02654 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
APOC1P02654 RN7SL81P-201ENST00000493781 261 ntBASIC11.86□□□□□ -0.51
APOC1P02654 NUP210P1-202ENST00000504322 710 ntBASIC11.86□□□□□ -0.51
APOC1P02654 ADM-202ENST00000524948 584 ntTSL 2 BASIC11.86□□□□□ -0.51
APOC1P02654 AL137779.3-201ENST00000553295 729 ntBASIC11.86□□□□□ -0.51
APOC1P02654 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC11.86□□□□□ -0.51
APOC1P02654 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC11.86□□□□□ -0.51
APOC1P02654 AC103810.3-201ENST00000583567 96 ntBASIC11.86□□□□□ -0.51
APOC1P02654 MIR2392-201ENST00000584881 84 ntBASIC11.86□□□□□ -0.51
APOC1P02654 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
APOC1P02654 AC092171.5-201ENST00000608012 942 ntBASIC11.86□□□□□ -0.51
APOC1P02654 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC11.86□□□□□ -0.51
APOC1P02654 AC006453.1-201ENST00000636037 1257 ntBASIC11.86□□□□□ -0.51
APOC1P02654 ZCCHC9-201ENST00000254037 4606 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
APOC1P02654 ZNF701-204ENST00000540331 5538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
APOC1P02654 AKR1C8P-201ENST00000578467 2182 ntTSL 2 BASIC11.86□□□□□ -0.51
APOC1P02654 ELMOD3-206ENST00000409890 2492 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
APOC1P02654 PYGM-201ENST00000164139 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
APOC1P02654 PCNX2-203ENST00000344698 5348 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
APOC1P02654 DCAF16-201ENST00000382247 4548 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
APOC1P02654 SLC12A6-205ENST00000458406 4425 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
APOC1P02654 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
APOC1P02654 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC11.86□□□□□ -0.51
APOC1P02654 LINC01744-201ENST00000457698 2042 ntTSL 2 BASIC11.86□□□□□ -0.51
APOC1P02654 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC11.86□□□□□ -0.51
APOC1P02654 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
APOC1P02654 SPOCK3-203ENST00000421836 3061 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
APOC1P02654 ZNF473-205ENST00000595661 4828 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
APOC1P02654 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
APOC1P02654 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC11.85□□□□□ -0.51
APOC1P02654 SLC5A10-201ENST00000317977 4436 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms