Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 FEN1P1-201ENST00000401028 1145 ntBASIC19.7■□□□□ 0.74
RIMBP3Q9UFD9 GAGE12D-201ENST00000405679 527 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RIMBP3Q9UFD9 GAGE12C-201ENST00000420398 527 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RIMBP3Q9UFD9 GAGE12F-201ENST00000440137 527 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RIMBP3Q9UFD9 GAGE12G-201ENST00000445148 527 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RIMBP3Q9UFD9 VN1R28P-201ENST00000452517 896 ntBASIC19.7■□□□□ 0.74
RIMBP3Q9UFD9 AL139807.1-201ENST00000500636 704 ntTSL 3 BASIC19.7■□□□□ 0.74
RIMBP3Q9UFD9 MEF2BNBP1-201ENST00000502742 330 ntBASIC19.7■□□□□ 0.74
RIMBP3Q9UFD9 PDLIM5-208ENST00000504489 538 ntTSL 4 BASIC19.7■□□□□ 0.74
RIMBP3Q9UFD9 TRMT112P1-201ENST00000505515 351 ntBASIC19.7■□□□□ 0.74
RIMBP3Q9UFD9 AC022447.7-201ENST00000509629 435 ntBASIC19.7■□□□□ 0.74
RIMBP3Q9UFD9 TP53TG3GP-201ENST00000567602 334 ntBASIC19.7■□□□□ 0.74
RIMBP3Q9UFD9 ZNF506-206ENST00000587452 575 ntTSL 4 BASIC19.7■□□□□ 0.74
RIMBP3Q9UFD9 AL157392.3-201ENST00000601075 833 ntTSL 5 BASIC19.7■□□□□ 0.74
RIMBP3Q9UFD9 GAGE13-201ENST00000612958 530 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RIMBP3Q9UFD9 ZNF772-203ENST00000425074 1601 ntTSL 2 BASIC19.7■□□□□ 0.74
RIMBP3Q9UFD9 RORC-201ENST00000318247 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
RIMBP3Q9UFD9 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RIMBP3Q9UFD9 GOLGA8A-201ENST00000359187 1877 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RIMBP3Q9UFD9 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
RIMBP3Q9UFD9 AC073869.1-201ENST00000415574 2762 ntBASIC19.7■□□□□ 0.74
RIMBP3Q9UFD9 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RIMBP3Q9UFD9 MPPE1-204ENST00000344987 1831 ntTSL 5 BASIC19.7■□□□□ 0.74
RIMBP3Q9UFD9 FMR1-220ENST00000621987 1352 ntTSL 5 BASIC19.69■□□□□ 0.74
RIMBP3Q9UFD9 TXN2-201ENST00000216185 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RIMBP3Q9UFD9 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
RIMBP3Q9UFD9 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
RIMBP3Q9UFD9 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
RIMBP3Q9UFD9 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RIMBP3Q9UFD9 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
RIMBP3Q9UFD9 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RIMBP3Q9UFD9 MRPL55-203ENST00000336520 744 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
RIMBP3Q9UFD9 SLAMF9-201ENST00000368092 849 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RIMBP3Q9UFD9 PDZK1IP1-202ENST00000371885 770 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
RIMBP3Q9UFD9 OBP2B-201ENST00000372032 702 ntTSL 5 BASIC19.69■□□□□ 0.74
RIMBP3Q9UFD9 AC104131.1-201ENST00000392363 1194 ntBASIC19.69■□□□□ 0.74
RIMBP3Q9UFD9 ANKRD61-201ENST00000409061 1257 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
RIMBP3Q9UFD9 GGCT-204ENST00000409390 767 ntTSL 2 BASIC19.69■□□□□ 0.74
RIMBP3Q9UFD9 AC064862.1-201ENST00000421221 201 ntBASIC19.69■□□□□ 0.74
RIMBP3Q9UFD9 AL050344.1-202ENST00000429666 614 ntTSL 3 BASIC19.69■□□□□ 0.74
RIMBP3Q9UFD9 MRPL55-221ENST00000430433 864 ntTSL 5 BASIC19.69■□□□□ 0.74
RIMBP3Q9UFD9 RPS21-204ENST00000450116 418 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RIMBP3Q9UFD9 GAPDHP66-201ENST00000509132 967 ntBASIC19.69■□□□□ 0.74
RIMBP3Q9UFD9 NDUFA2-204ENST00000512088 627 ntTSL 2 BASIC19.69■□□□□ 0.74
RIMBP3Q9UFD9 AC084082.1-202ENST00000517961 956 ntTSL 2 BASIC19.69■□□□□ 0.74
RIMBP3Q9UFD9 AF186192.1-201ENST00000525376 572 ntBASIC19.69■□□□□ 0.74
RIMBP3Q9UFD9 AC135048.2-201ENST00000572471 561 ntTSL 4 BASIC19.69■□□□□ 0.74
RIMBP3Q9UFD9 AC104996.2-201ENST00000583091 1000 ntBASIC19.69■□□□□ 0.74
RIMBP3Q9UFD9 AC006435.3-201ENST00000611041 203 ntBASIC19.69■□□□□ 0.74
RIMBP3Q9UFD9 LINC01632-202ENST00000617368 533 ntTSL 5 BASIC19.69■□□□□ 0.74
RIMBP3Q9UFD9 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
RIMBP3Q9UFD9 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RIMBP3Q9UFD9 TGM5-207ENST00000622115 2202 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
RIMBP3Q9UFD9 STRAP-202ENST00000419869 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RIMBP3Q9UFD9 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RIMBP3Q9UFD9 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
RIMBP3Q9UFD9 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RIMBP3Q9UFD9 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RIMBP3Q9UFD9 SERPINA1-204ENST00000402629 1450 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RIMBP3Q9UFD9 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC19.69■□□□□ 0.74
RIMBP3Q9UFD9 TBC1D3I-201ENST00000616671 1982 ntTSL 5 BASIC19.69■□□□□ 0.74
RIMBP3Q9UFD9 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RIMBP3Q9UFD9 AGA-201ENST00000264595 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RIMBP3Q9UFD9 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC19.69■□□□□ 0.74
RIMBP3Q9UFD9 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RIMBP3Q9UFD9 RNU12-201ENST00000362512 150 ntBASIC19.69■□□□□ 0.74
RIMBP3Q9UFD9 EIF4E2-204ENST00000409322 797 ntTSL 5 BASIC19.69■□□□□ 0.74
RIMBP3Q9UFD9 AC245060.2-201ENST00000412149 524 ntTSL 3 BASIC19.69■□□□□ 0.74
RIMBP3Q9UFD9 USP32P3-201ENST00000413270 1174 ntBASIC19.69■□□□□ 0.74
RIMBP3Q9UFD9 SLC25A5P9-201ENST00000509905 910 ntBASIC19.69■□□□□ 0.74
RIMBP3Q9UFD9 HNRNPA3P13-201ENST00000512222 1122 ntBASIC19.69■□□□□ 0.74
RIMBP3Q9UFD9 CD63-207ENST00000548898 727 ntTSL 2 BASIC19.69■□□□□ 0.74
RIMBP3Q9UFD9 BCO1-203ENST00000564552 949 ntTSL 2 BASIC19.69■□□□□ 0.74
RIMBP3Q9UFD9 AC126755.6-201ENST00000615944 111 ntBASIC19.69■□□□□ 0.74
RIMBP3Q9UFD9 AC008740.2-201ENST00000617918 110 ntBASIC19.69■□□□□ 0.74
RIMBP3Q9UFD9 AC245519.2-201ENST00000633673 475 ntTSL 3 BASIC19.69■□□□□ 0.74
RIMBP3Q9UFD9 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RIMBP3Q9UFD9 CCNB3P1-201ENST00000504855 1431 ntBASIC19.68■□□□□ 0.74
RIMBP3Q9UFD9 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RIMBP3Q9UFD9 AC132872.4-202ENST00000622924 2756 ntBASIC19.68■□□□□ 0.74
RIMBP3Q9UFD9 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RIMBP3Q9UFD9 KNSTRN-203ENST00000448395 1464 ntTSL 2 BASIC19.68■□□□□ 0.74
RIMBP3Q9UFD9 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC19.68■□□□□ 0.74
RIMBP3Q9UFD9 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
RIMBP3Q9UFD9 NDUFA7-201ENST00000301457 601 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RIMBP3Q9UFD9 OR51V1-201ENST00000321255 966 ntBASIC19.68■□□□□ 0.74
RIMBP3Q9UFD9 HNRNPA1P53-201ENST00000441603 946 ntBASIC19.68■□□□□ 0.74
RIMBP3Q9UFD9 IP6K2-222ENST00000450045 689 ntTSL 3 BASIC19.68■□□□□ 0.74
RIMBP3Q9UFD9 AC022167.1-201ENST00000564919 409 ntTSL 3 BASIC19.68■□□□□ 0.74
RIMBP3Q9UFD9 TMEM208-210ENST00000565201 832 ntTSL 2 BASIC19.68■□□□□ 0.74
RIMBP3Q9UFD9 AC008567.1-201ENST00000567299 1192 ntBASIC19.68■□□□□ 0.74
RIMBP3Q9UFD9 COX10-AS1-203ENST00000577798 936 ntTSL 3 BASIC19.68■□□□□ 0.74
RIMBP3Q9UFD9 RN7SL577P-201ENST00000584532 303 ntBASIC19.68■□□□□ 0.74
RIMBP3Q9UFD9 AC061709.2-201ENST00000624053 898 ntBASIC19.68■□□□□ 0.74
RIMBP3Q9UFD9 OR51V1-202ENST00000641270 948 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
RIMBP3Q9UFD9 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
RIMBP3Q9UFD9 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC19.68■□□□□ 0.74
RIMBP3Q9UFD9 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC19.67■□□□□ 0.74
RIMBP3Q9UFD9 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RIMBP3Q9UFD9 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms