Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CSNK1DP48730 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CSNK1DP48730 AC098934.1-201ENST00000443294 1835 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CSNK1DP48730 ITFG1-204ENST00000544001 1849 ntTSL 2 BASIC13.28□□□□□ -0.28
CSNK1DP48730 RNA5SP248-201ENST00000365602 127 ntBASIC13.28□□□□□ -0.28
CSNK1DP48730 GZMH-202ENST00000382548 687 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CSNK1DP48730 DTX3L-202ENST00000383661 687 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CSNK1DP48730 RPSAP6-201ENST00000417882 882 ntBASIC13.28□□□□□ -0.28
CSNK1DP48730 AC007383.2-201ENST00000420509 752 ntTSL 2 BASIC13.28□□□□□ -0.28
CSNK1DP48730 OR7E37P-201ENST00000421076 897 ntBASIC13.28□□□□□ -0.28
CSNK1DP48730 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC13.28□□□□□ -0.28
CSNK1DP48730 AL118511.1-201ENST00000439341 794 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CSNK1DP48730 AL356000.1-201ENST00000441073 1238 ntBASIC13.28□□□□□ -0.28
CSNK1DP48730 AP005273.1-201ENST00000444862 522 ntTSL 3 BASIC13.28□□□□□ -0.28
CSNK1DP48730 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC13.28□□□□□ -0.28
CSNK1DP48730 AC010136.1-201ENST00000450996 568 ntTSL 4 BASIC13.28□□□□□ -0.28
CSNK1DP48730 AC092896.1-201ENST00000465850 380 ntBASIC13.28□□□□□ -0.28
CSNK1DP48730 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC13.28□□□□□ -0.28
CSNK1DP48730 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC13.28□□□□□ -0.28
CSNK1DP48730 AC034102.3-201ENST00000551846 300 ntTSL 3 BASIC13.28□□□□□ -0.28
CSNK1DP48730 AC021755.2-201ENST00000559022 461 ntTSL 5 BASIC13.28□□□□□ -0.28
CSNK1DP48730 AC133555.4-201ENST00000569081 152 ntBASIC13.28□□□□□ -0.28
CSNK1DP48730 ZDHHC4-202ENST00000396706 1942 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CSNK1DP48730 DDX11L2-201ENST00000437401 1398 ntBASIC13.28□□□□□ -0.28
CSNK1DP48730 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC13.28□□□□□ -0.28
CSNK1DP48730 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CSNK1DP48730 CICP20-201ENST00000443330 2801 ntBASIC13.28□□□□□ -0.28
CSNK1DP48730 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CSNK1DP48730 ALX1-201ENST00000316824 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CSNK1DP48730 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CSNK1DP48730 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CSNK1DP48730 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CSNK1DP48730 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CSNK1DP48730 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
CSNK1DP48730 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC13.28□□□□□ -0.28
CSNK1DP48730 TRIM39-RPP21-201ENST00000623385 1698 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CSNK1DP48730 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CSNK1DP48730 CA2-201ENST00000285379 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CSNK1DP48730 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.27□□□□□ -0.28
CSNK1DP48730 AL031666.1-201ENST00000413818 1809 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CSNK1DP48730 PEG13-201ENST00000631594 5667 ntBASIC13.27□□□□□ -0.28
CSNK1DP48730 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CSNK1DP48730 GAS6-AS2-201ENST00000608651 1952 ntTSL 2 BASIC13.27□□□□□ -0.28
CSNK1DP48730 HRC-203ENST00000595625 2044 ntTSL 5 BASIC13.27□□□□□ -0.28
CSNK1DP48730 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
CSNK1DP48730 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CSNK1DP48730 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CSNK1DP48730 IKZF1-206ENST00000359197 3487 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CSNK1DP48730 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CSNK1DP48730 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CSNK1DP48730 GUCY1B3-207ENST00000513437 2355 ntTSL 2 BASIC13.27□□□□□ -0.29
CSNK1DP48730 RNA5SP84-201ENST00000364740 107 ntBASIC13.27□□□□□ -0.29
CSNK1DP48730 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC13.27□□□□□ -0.29
CSNK1DP48730 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CSNK1DP48730 LIMS2-203ENST00000409254 867 ntTSL 3 BASIC13.27□□□□□ -0.29
CSNK1DP48730 AC019349.1-201ENST00000411759 476 ntTSL 3 BASIC13.27□□□□□ -0.29
CSNK1DP48730 ASLP1-201ENST00000428790 637 ntBASIC13.27□□□□□ -0.29
CSNK1DP48730 NR1I3-210ENST00000437437 973 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CSNK1DP48730 IGFL1-201ENST00000437936 769 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CSNK1DP48730 RPL3P5-201ENST00000441645 1232 ntBASIC13.27□□□□□ -0.29
CSNK1DP48730 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CSNK1DP48730 RNU1-80P-201ENST00000459500 161 ntBASIC13.27□□□□□ -0.29
CSNK1DP48730 HNRNPA3P6-201ENST00000472163 1006 ntBASIC13.27□□□□□ -0.29
CSNK1DP48730 AADAC-202ENST00000488869 719 ntTSL 2 BASIC13.27□□□□□ -0.29
CSNK1DP48730 ZNF816-208ENST00000535506 529 ntTSL 4 BASIC13.27□□□□□ -0.29
CSNK1DP48730 GOLT1B-206ENST00000542038 933 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CSNK1DP48730 GOLGA2P10-201ENST00000550961 817 ntBASIC13.27□□□□□ -0.29
CSNK1DP48730 TLE2-205ENST00000586422 389 ntTSL 5 BASIC13.27□□□□□ -0.29
CSNK1DP48730 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
CSNK1DP48730 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CSNK1DP48730 LYPLA1-202ENST00000343231 1308 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CSNK1DP48730 AC026271.1-201ENST00000447794 1348 ntBASIC13.27□□□□□ -0.29
CSNK1DP48730 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CSNK1DP48730 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC13.27□□□□□ -0.29
CSNK1DP48730 C1QTNF3-202ENST00000382065 2802 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CSNK1DP48730 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC13.27□□□□□ -0.29
CSNK1DP48730 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
CSNK1DP48730 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CSNK1DP48730 PAK1-215ENST00000530617 3001 ntTSL 2 BASIC13.27□□□□□ -0.29
CSNK1DP48730 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CSNK1DP48730 AC005549.1-201ENST00000579438 1629 ntBASIC13.27□□□□□ -0.29
CSNK1DP48730 ZP4-201ENST00000366570 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CSNK1DP48730 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CSNK1DP48730 FBXO5-201ENST00000229758 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CSNK1DP48730 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CSNK1DP48730 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CSNK1DP48730 CYP24A1-203ENST00000395955 2227 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CSNK1DP48730 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC13.27□□□□□ -0.29
CSNK1DP48730 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CSNK1DP48730 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13.26□□□□□ -0.29
CSNK1DP48730 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
CSNK1DP48730 R3HDM2-215ENST00000634871 4092 ntTSL 5 BASIC13.26□□□□□ -0.29
CSNK1DP48730 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CSNK1DP48730 CD1A-201ENST00000289429 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CSNK1DP48730 PIGC-202ENST00000367728 2630 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
CSNK1DP48730 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CSNK1DP48730 PMF1-201ENST00000368273 884 ntTSL 2 BASIC13.26□□□□□ -0.29
CSNK1DP48730 CXorf40B-203ENST00000370406 1653 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CSNK1DP48730 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
CSNK1DP48730 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms