Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MMP13P45452 GRM4-209ENST00000609222 3176 ntTSL 2 BASIC13.91□□□□□ -0.18
MMP13P45452 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MMP13P45452 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC13.91□□□□□ -0.18
MMP13P45452 OR7E115P-201ENST00000382617 1024 ntBASIC13.91□□□□□ -0.18
MMP13P45452 MPV17-204ENST00000399052 749 ntTSL 4 BASIC13.91□□□□□ -0.18
MMP13P45452 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
MMP13P45452 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC13.91□□□□□ -0.18
MMP13P45452 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
MMP13P45452 AC041040.1-201ENST00000425197 460 ntBASIC13.91□□□□□ -0.18
MMP13P45452 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC13.91□□□□□ -0.18
MMP13P45452 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC13.91□□□□□ -0.18
MMP13P45452 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC13.91□□□□□ -0.18
MMP13P45452 RPS23-204ENST00000507980 836 ntTSL 2 BASIC13.91□□□□□ -0.18
MMP13P45452 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
MMP13P45452 TMCO5B-205ENST00000530020 894 ntBASIC13.91□□□□□ -0.18
MMP13P45452 PDCD2-205ENST00000537445 1114 ntTSL 3 BASIC13.91□□□□□ -0.18
MMP13P45452 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
MMP13P45452 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC13.91□□□□□ -0.18
MMP13P45452 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC13.91□□□□□ -0.18
MMP13P45452 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC13.91□□□□□ -0.18
MMP13P45452 AC135983.4-201ENST00000564116 1262 ntBASIC13.91□□□□□ -0.18
MMP13P45452 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC13.91□□□□□ -0.18
MMP13P45452 NT5C-204ENST00000578337 582 ntTSL 2 BASIC13.91□□□□□ -0.18
MMP13P45452 AC073352.2-201ENST00000609385 439 ntBASIC13.91□□□□□ -0.18
MMP13P45452 AC011491.1-203ENST00000637688 543 ntBASIC13.91□□□□□ -0.18
MMP13P45452 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
MMP13P45452 ZCRB1-201ENST00000266529 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MMP13P45452 ARMCX6-201ENST00000361910 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MMP13P45452 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
MMP13P45452 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
MMP13P45452 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
MMP13P45452 SP140L-203ENST00000415673 2665 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
MMP13P45452 RNFT2-201ENST00000257575 3882 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
MMP13P45452 AL449403.1-201ENST00000432783 1577 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
MMP13P45452 MLPH-202ENST00000338530 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
MMP13P45452 LINC00943-204ENST00000537374 1688 ntTSL 5 BASIC13.91□□□□□ -0.18
MMP13P45452 POM121L7P-201ENST00000329949 2404 ntBASIC13.91□□□□□ -0.18
MMP13P45452 FAM95C-205ENST00000637556 2421 ntAPPRIS P5 TSL 2 BASIC13.91□□□□□ -0.18
MMP13P45452 CEACAM20-201ENST00000611497 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
MMP13P45452 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MMP13P45452 TNFRSF8-201ENST00000263932 3686 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MMP13P45452 EHMT2-202ENST00000375530 3856 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
MMP13P45452 ATG10-201ENST00000282185 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MMP13P45452 PISD-203ENST00000397500 2194 ntTSL 5 BASIC13.9□□□□□ -0.18
MMP13P45452 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MMP13P45452 CDC42-202ENST00000344548 2256 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MMP13P45452 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC13.9□□□□□ -0.18
MMP13P45452 LINC01649-202ENST00000634255 1743 ntTSL 5 BASIC13.9□□□□□ -0.18
MMP13P45452 SLCO2A1-208ENST00000493729 1918 ntTSL 5 BASIC13.9□□□□□ -0.18
MMP13P45452 PIGC-202ENST00000367728 2630 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
MMP13P45452 MGAT4EP-201ENST00000330493 2810 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
MMP13P45452 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
MMP13P45452 C20orf141-201ENST00000380589 730 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MMP13P45452 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
MMP13P45452 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
MMP13P45452 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC13.9□□□□□ -0.18
MMP13P45452 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC13.9□□□□□ -0.18
MMP13P45452 AC069218.1-201ENST00000435269 762 ntBASIC13.9□□□□□ -0.18
MMP13P45452 AC098935.1-201ENST00000446057 611 ntBASIC13.9□□□□□ -0.18
MMP13P45452 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC13.9□□□□□ -0.18
MMP13P45452 AC006529.1-201ENST00000459978 637 ntBASIC13.9□□□□□ -0.18
MMP13P45452 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC13.9□□□□□ -0.18
MMP13P45452 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC13.9□□□□□ -0.18
MMP13P45452 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC13.9□□□□□ -0.18
MMP13P45452 FOS-206ENST00000555347 1280 ntTSL 2 BASIC13.9□□□□□ -0.18
MMP13P45452 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC13.9□□□□□ -0.18
MMP13P45452 AC087045.2-201ENST00000606279 1003 ntBASIC13.9□□□□□ -0.18
MMP13P45452 MIR6842-201ENST00000612539 65 ntBASIC13.9□□□□□ -0.18
MMP13P45452 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC13.9□□□□□ -0.18
MMP13P45452 AC073911.3-201ENST00000624401 631 ntBASIC13.9□□□□□ -0.18
MMP13P45452 HELLS-212ENST00000630929 400 ntTSL 5 BASIC13.9□□□□□ -0.18
MMP13P45452 GRIN1-205ENST00000371555 4003 ntTSL 5 BASIC13.9□□□□□ -0.18
MMP13P45452 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
MMP13P45452 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC13.9□□□□□ -0.18
MMP13P45452 MAX-212ENST00000555932 1673 ntTSL 5 BASIC13.9□□□□□ -0.18
MMP13P45452 ECM1-202ENST00000369047 2070 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
MMP13P45452 PRAME-203ENST00000402697 2057 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
MMP13P45452 ZSCAN5B-202ENST00000586855 2059 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
MMP13P45452 ADAM32-206ENST00000519315 2168 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
MMP13P45452 GOLGA6L7P-201ENST00000567390 2397 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
MMP13P45452 MOCS1-204ENST00000373188 3358 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
MMP13P45452 ZNF287-201ENST00000395824 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MMP13P45452 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MMP13P45452 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MMP13P45452 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
MMP13P45452 HNF1A-208ENST00000541395 3332 ntTSL 2 BASIC13.9□□□□□ -0.18
MMP13P45452 GLP1R-201ENST00000373256 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MMP13P45452 TRAPPC2L-211ENST00000565504 3102 ntTSL 2 BASIC13.9□□□□□ -0.18
MMP13P45452 SUCO-209ENST00000610051 2925 ntTSL 2 BASIC13.9□□□□□ -0.18
MMP13P45452 GUCY1A3-205ENST00000506455 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MMP13P45452 GPR55-205ENST00000622008 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MMP13P45452 LGALS3BP-201ENST00000262776 2405 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MMP13P45452 TBC1D3F-201ENST00000620210 2117 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
MMP13P45452 FBXO5-201ENST00000229758 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MMP13P45452 RBM22P2-201ENST00000393978 1814 ntBASIC13.9□□□□□ -0.18
MMP13P45452 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
MMP13P45452 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
MMP13P45452 HNRNPLP1-201ENST00000421896 1501 ntBASIC13.9□□□□□ -0.19
MMP13P45452 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms