Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 U3.49-201ENST00000391065 214 ntBASIC8.5□□□□□ -1.05
VPS13DQ5THJ4 MEOX1-203ENST00000393661 1206 ntTSL 3 BASIC8.5□□□□□ -1.05
VPS13DQ5THJ4 OR2A14-201ENST00000408899 1012 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
VPS13DQ5THJ4 TMEM176A-201ENST00000004103 1261 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
VPS13DQ5THJ4 KRTAP4-16-201ENST00000440582 708 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
VPS13DQ5THJ4 TIMM23B-202ENST00000451577 1152 ntTSL 2 BASIC8.5□□□□□ -1.05
VPS13DQ5THJ4 PAX5-209ENST00000520154 1255 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
VPS13DQ5THJ4 AC020909.3-201ENST00000598194 375 ntTSL 3 BASIC8.5□□□□□ -1.05
VPS13DQ5THJ4 SIGLEC21P-201ENST00000598990 1010 ntBASIC8.5□□□□□ -1.05
VPS13DQ5THJ4 AC244517.2-204ENST00000624802 415 ntTSL 3 BASIC8.5□□□□□ -1.05
VPS13DQ5THJ4 AL669831.6-201ENST00000635557 837 ntBASIC8.5□□□□□ -1.05
VPS13DQ5THJ4 AC089987.1-202ENST00000641959 426 ntBASIC8.5□□□□□ -1.05
VPS13DQ5THJ4 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
VPS13DQ5THJ4 AC078850.1-201ENST00000514265 1623 ntTSL 2 BASIC8.49□□□□□ -1.05
VPS13DQ5THJ4 C17orf75-202ENST00000577809 1642 ntAPPRIS P2 TSL 1 (best) BASIC8.49□□□□□ -1.05
VPS13DQ5THJ4 AL356130.1-201ENST00000620188 1965 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
VPS13DQ5THJ4 LINC02228-202ENST00000641261 2489 ntBASIC8.49□□□□□ -1.05
VPS13DQ5THJ4 ALOX5-201ENST00000374391 2506 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
VPS13DQ5THJ4 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
VPS13DQ5THJ4 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
VPS13DQ5THJ4 ZWILCH-203ENST00000535141 2206 ntTSL 2 BASIC8.49□□□□□ -1.05
VPS13DQ5THJ4 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC8.49□□□□□ -1.05
VPS13DQ5THJ4 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
VPS13DQ5THJ4 AL353747.1-201ENST00000404577 267 ntBASIC8.49□□□□□ -1.05
VPS13DQ5THJ4 LINC01849-201ENST00000414647 517 ntTSL 4 BASIC8.49□□□□□ -1.05
VPS13DQ5THJ4 CCDC153-202ENST00000415318 1173 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
VPS13DQ5THJ4 RPL36AP29-201ENST00000415878 321 ntBASIC8.49□□□□□ -1.05
VPS13DQ5THJ4 PTPN2P2-201ENST00000433704 1024 ntBASIC8.49□□□□□ -1.05
VPS13DQ5THJ4 SLC48A1-202ENST00000442892 1024 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
VPS13DQ5THJ4 AL049871.1-201ENST00000557475 880 ntTSL 5 BASIC8.49□□□□□ -1.05
VPS13DQ5THJ4 KRT16P1-202ENST00000577750 679 ntTSL 3 BASIC8.49□□□□□ -1.05
VPS13DQ5THJ4 AC026401.3-201ENST00000624682 882 ntBASIC8.49□□□□□ -1.05
VPS13DQ5THJ4 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC8.49□□□□□ -1.05
VPS13DQ5THJ4 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC8.49□□□□□ -1.05
VPS13DQ5THJ4 TREH-202ENST00000397925 1718 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
VPS13DQ5THJ4 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC8.49□□□□□ -1.05
VPS13DQ5THJ4 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC8.49□□□□□ -1.05
VPS13DQ5THJ4 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
VPS13DQ5THJ4 TTN-AS1-209ENST00000456053 2033 ntTSL 2 BASIC8.49□□□□□ -1.05
VPS13DQ5THJ4 LINC01442-202ENST00000618872 1600 ntTSL 2 BASIC8.49□□□□□ -1.05
VPS13DQ5THJ4 AL118506.1-201ENST00000601296 3082 ntBASIC8.49□□□□□ -1.05
VPS13DQ5THJ4 ARHGAP25-201ENST00000409030 2936 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
VPS13DQ5THJ4 CFDP1-201ENST00000283882 1275 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
VPS13DQ5THJ4 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC8.49□□□□□ -1.05
VPS13DQ5THJ4 PRAMEF32P-201ENST00000431596 1068 ntBASIC8.49□□□□□ -1.05
VPS13DQ5THJ4 AC104371.1-201ENST00000522077 797 ntBASIC8.49□□□□□ -1.05
VPS13DQ5THJ4 AC091588.2-201ENST00000578741 366 ntTSL 3 BASIC8.49□□□□□ -1.05
VPS13DQ5THJ4 MIR4294-201ENST00000584548 76 ntBASIC8.49□□□□□ -1.05
VPS13DQ5THJ4 EMG1-206ENST00000607161 1087 ntAPPRIS P5 TSL 2 BASIC8.49□□□□□ -1.05
VPS13DQ5THJ4 DMTF1-201ENST00000331242 3801 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
VPS13DQ5THJ4 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
VPS13DQ5THJ4 VAV1-202ENST00000539284 2627 ntTSL 5 BASIC8.49□□□□□ -1.05
VPS13DQ5THJ4 PAX6-249ENST00000639034 1597 ntTSL 5 BASIC8.49□□□□□ -1.05
VPS13DQ5THJ4 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
VPS13DQ5THJ4 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
VPS13DQ5THJ4 SNAP25-201ENST00000254976 2053 ntAPPRIS P5 TSL 1 (best) BASIC8.49□□□□□ -1.05
VPS13DQ5THJ4 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
VPS13DQ5THJ4 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
VPS13DQ5THJ4 PLA1A-206ENST00000495992 1695 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
VPS13DQ5THJ4 PVT1-203ENST00000513868 1699 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
VPS13DQ5THJ4 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
VPS13DQ5THJ4 LNP1-201ENST00000383693 2210 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
VPS13DQ5THJ4 IGKV3D-20-201ENST00000390270 445 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
VPS13DQ5THJ4 CYTOR-202ENST00000409054 1096 ntTSL 2 BASIC8.49□□□□□ -1.05
VPS13DQ5THJ4 AC244453.1-201ENST00000427872 494 ntTSL 3 BASIC8.49□□□□□ -1.05
VPS13DQ5THJ4 PRDX2P2-201ENST00000451920 587 ntBASIC8.49□□□□□ -1.05
VPS13DQ5THJ4 IGKV3-20-201ENST00000492167 400 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
VPS13DQ5THJ4 AC026785.1-201ENST00000505520 580 ntBASIC8.49□□□□□ -1.05
VPS13DQ5THJ4 AC008676.2-201ENST00000519499 741 ntTSL 3 BASIC8.49□□□□□ -1.05
VPS13DQ5THJ4 SMIM6-202ENST00000579469 957 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
VPS13DQ5THJ4 AC011471.2-201ENST00000588192 523 ntTSL 4 BASIC8.49□□□□□ -1.05
VPS13DQ5THJ4 AL627230.3-201ENST00000622239 192 ntBASIC8.49□□□□□ -1.05
VPS13DQ5THJ4 AC105206.1-202ENST00000314927 2368 ntBASIC8.49□□□□□ -1.05
VPS13DQ5THJ4 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
VPS13DQ5THJ4 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
VPS13DQ5THJ4 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
VPS13DQ5THJ4 RNF113A-201ENST00000371442 1353 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
VPS13DQ5THJ4 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
VPS13DQ5THJ4 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC8.49□□□□□ -1.05
VPS13DQ5THJ4 MKRN5P-201ENST00000445263 1467 ntBASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 USP5-201ENST00000229268 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 OR4C12-201ENST00000335238 1063 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 AL023754.1-201ENST00000424696 863 ntTSL 2 BASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 FANCD2OS-204ENST00000450660 1055 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 AC007405.2-203ENST00000455988 547 ntTSL 4 BASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 LAIR1-217ENST00000474878 814 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 RN7SL756P-201ENST00000488739 268 ntBASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 AC104123.1-201ENST00000502645 473 ntTSL 5 BASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 OLR1-211ENST00000545927 1008 ntTSL 2 BASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 AC007540.1-201ENST00000548473 507 ntTSL 3 BASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 APOC1P1-202ENST00000571466 253 ntBASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 AP005121.2-201ENST00000583306 1101 ntBASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 H3F3B-212ENST00000592643 795 ntTSL 3 BASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 AC011458.2-201ENST00000603937 207 ntBASIC8.48□□□□□ -1.05
VPS13DQ5THJ4 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms