Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC14.04□□□□□ -0.16
SHKBP1Q8TBC3 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHKBP1Q8TBC3 PGAP2-204ENST00000396991 1798 ntTSL 5 BASIC14.04□□□□□ -0.16
SHKBP1Q8TBC3 LINC00638-201ENST00000555578 2518 ntBASIC14.04□□□□□ -0.16
SHKBP1Q8TBC3 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SHKBP1Q8TBC3 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHKBP1Q8TBC3 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SHKBP1Q8TBC3 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC14.04□□□□□ -0.16
SHKBP1Q8TBC3 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC14.04□□□□□ -0.16
SHKBP1Q8TBC3 PAEP-201ENST00000277508 821 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHKBP1Q8TBC3 SLC25A5-201ENST00000317881 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHKBP1Q8TBC3 OR2V2-201ENST00000328275 948 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
SHKBP1Q8TBC3 TAC4-203ENST00000352793 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHKBP1Q8TBC3 UROS-201ENST00000368774 744 ntTSL 2 BASIC14.04□□□□□ -0.16
SHKBP1Q8TBC3 IGLJ1-201ENST00000390320 127 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
SHKBP1Q8TBC3 MKNK1-205ENST00000428112 1270 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
SHKBP1Q8TBC3 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC14.04□□□□□ -0.16
SHKBP1Q8TBC3 PSME2P2-201ENST00000453033 700 ntBASIC14.04□□□□□ -0.16
SHKBP1Q8TBC3 PRSS46-201ENST00000463091 982 ntAPPRIS P1 TSL 4 BASIC14.04□□□□□ -0.16
SHKBP1Q8TBC3 ARHGEF26-AS1-203ENST00000480639 582 ntTSL 2 BASIC14.04□□□□□ -0.16
SHKBP1Q8TBC3 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC14.04□□□□□ -0.16
SHKBP1Q8TBC3 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC14.04□□□□□ -0.16
SHKBP1Q8TBC3 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC14.04□□□□□ -0.16
SHKBP1Q8TBC3 ACY3-202ENST00000529256 933 ntTSL 3 BASIC14.04□□□□□ -0.16
SHKBP1Q8TBC3 ANAPC15-209ENST00000538919 849 ntAPPRIS P3 TSL 3 BASIC14.04□□□□□ -0.16
SHKBP1Q8TBC3 PRR20FP-201ENST00000603320 180 ntBASIC14.04□□□□□ -0.16
SHKBP1Q8TBC3 SNORA50D-202ENST00000627561 132 ntBASIC14.04□□□□□ -0.16
SHKBP1Q8TBC3 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC14.04□□□□□ -0.16
SHKBP1Q8TBC3 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHKBP1Q8TBC3 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
SHKBP1Q8TBC3 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHKBP1Q8TBC3 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SHKBP1Q8TBC3 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SHKBP1Q8TBC3 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHKBP1Q8TBC3 CYP2B6-202ENST00000593831 1426 ntTSL 2 BASIC14.04□□□□□ -0.16
SHKBP1Q8TBC3 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHKBP1Q8TBC3 CA6-205ENST00000480186 1493 ntTSL 2 BASIC14.04□□□□□ -0.16
SHKBP1Q8TBC3 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHKBP1Q8TBC3 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHKBP1Q8TBC3 LINC02226-201ENST00000501071 1587 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SHKBP1Q8TBC3 MARK2P9-201ENST00000430958 1727 ntBASIC14.04□□□□□ -0.16
SHKBP1Q8TBC3 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
SHKBP1Q8TBC3 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SHKBP1Q8TBC3 LINC01744-201ENST00000457698 2042 ntTSL 2 BASIC14.03□□□□□ -0.16
SHKBP1Q8TBC3 AMT-221ENST00000538581 2038 ntTSL 2 BASIC14.03□□□□□ -0.16
SHKBP1Q8TBC3 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
SHKBP1Q8TBC3 AC004623.1-201ENST00000624592 2127 ntBASIC14.03□□□□□ -0.16
SHKBP1Q8TBC3 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
SHKBP1Q8TBC3 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC14.03□□□□□ -0.16
SHKBP1Q8TBC3 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC14.03□□□□□ -0.16
SHKBP1Q8TBC3 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
SHKBP1Q8TBC3 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC14.03□□□□□ -0.16
SHKBP1Q8TBC3 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC14.03□□□□□ -0.16
SHKBP1Q8TBC3 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SHKBP1Q8TBC3 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
SHKBP1Q8TBC3 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SHKBP1Q8TBC3 MRPL55-219ENST00000391867 685 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
SHKBP1Q8TBC3 SNORA50D-201ENST00000408059 134 ntBASIC14.03□□□□□ -0.16
SHKBP1Q8TBC3 RPSAP6-201ENST00000417882 882 ntBASIC14.03□□□□□ -0.16
SHKBP1Q8TBC3 AC093495.1-201ENST00000420253 1067 ntTSL 4 BASIC14.03□□□□□ -0.16
SHKBP1Q8TBC3 GRP-202ENST00000420468 579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SHKBP1Q8TBC3 EEF1DP5-201ENST00000431410 772 ntBASIC14.03□□□□□ -0.16
SHKBP1Q8TBC3 AL359979.2-201ENST00000435108 613 ntTSL 3 BASIC14.03□□□□□ -0.16
SHKBP1Q8TBC3 AL137078.1-201ENST00000446280 404 ntTSL 2 BASIC14.03□□□□□ -0.16
SHKBP1Q8TBC3 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC14.03□□□□□ -0.16
SHKBP1Q8TBC3 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC14.03□□□□□ -0.16
SHKBP1Q8TBC3 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC14.03□□□□□ -0.16
SHKBP1Q8TBC3 JPT2-214ENST00000569765 782 ntTSL 2 BASIC14.03□□□□□ -0.16
SHKBP1Q8TBC3 CCND3P2-201ENST00000579393 537 ntBASIC14.03□□□□□ -0.16
SHKBP1Q8TBC3 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC14.03□□□□□ -0.16
SHKBP1Q8TBC3 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SHKBP1Q8TBC3 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SHKBP1Q8TBC3 NAAA-203ENST00000505594 1425 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
SHKBP1Q8TBC3 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC14.03□□□□□ -0.16
SHKBP1Q8TBC3 APEX1-201ENST00000216714 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SHKBP1Q8TBC3 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SHKBP1Q8TBC3 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
SHKBP1Q8TBC3 PIGB-202ENST00000539642 1668 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
SHKBP1Q8TBC3 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
SHKBP1Q8TBC3 CA2-201ENST00000285379 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SHKBP1Q8TBC3 GFI1B-202ENST00000372122 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SHKBP1Q8TBC3 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC14.03□□□□□ -0.16
SHKBP1Q8TBC3 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC14.03□□□□□ -0.16
SHKBP1Q8TBC3 FAM189A2-202ENST00000303068 2051 ntTSL 2 BASIC14.03□□□□□ -0.16
SHKBP1Q8TBC3 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SHKBP1Q8TBC3 MANEA-AS1-201ENST00000564541 2268 ntBASIC14.03□□□□□ -0.16
SHKBP1Q8TBC3 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SHKBP1Q8TBC3 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC14.03□□□□□ -0.16
SHKBP1Q8TBC3 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
SHKBP1Q8TBC3 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC14.03□□□□□ -0.16
SHKBP1Q8TBC3 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SHKBP1Q8TBC3 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
SHKBP1Q8TBC3 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SHKBP1Q8TBC3 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
SHKBP1Q8TBC3 AL645937.6-201ENST00000641122 3727 ntBASIC14.02□□□□□ -0.16
SHKBP1Q8TBC3 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
SHKBP1Q8TBC3 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SHKBP1Q8TBC3 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SHKBP1Q8TBC3 AL445250.1-201ENST00000641671 2259 ntBASIC14.02□□□□□ -0.16
SHKBP1Q8TBC3 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms