Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 VEGFA-223ENST00000523125 541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDE6BP35913 CALM3-206ENST00000594523 540 ntTSL 4 BASIC16.28■□□□□ 0.2
PDE6BP35913 LINC02340-202ENST00000620494 573 ntTSL 4 BASIC16.28■□□□□ 0.2
PDE6BP35913 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDE6BP35913 AC004554.2-201ENST00000634846 1893 ntTSL 5 BASIC16.28■□□□□ 0.2
PDE6BP35913 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
PDE6BP35913 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PDE6BP35913 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC16.28■□□□□ 0.2
PDE6BP35913 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC16.28■□□□□ 0.2
PDE6BP35913 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDE6BP35913 RNASE7-201ENST00000298690 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDE6BP35913 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC16.28■□□□□ 0.2
PDE6BP35913 HRC-203ENST00000595625 2044 ntTSL 5 BASIC16.28■□□□□ 0.2
PDE6BP35913 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDE6BP35913 ALLC-201ENST00000252505 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDE6BP35913 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDE6BP35913 EGLN3-205ENST00000547327 2849 ntBASIC16.27■□□□□ 0.2
PDE6BP35913 RMND5B-212ENST00000542098 1681 ntTSL 5 BASIC16.27■□□□□ 0.2
PDE6BP35913 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDE6BP35913 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDE6BP35913 SRSF5-201ENST00000394366 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDE6BP35913 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDE6BP35913 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDE6BP35913 AC116903.2-201ENST00000561674 1304 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PDE6BP35913 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
PDE6BP35913 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC16.27■□□□□ 0.2
PDE6BP35913 POM121L14P-201ENST00000406100 1558 ntBASIC16.27■□□□□ 0.2
PDE6BP35913 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDE6BP35913 ZNF277-201ENST00000361822 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDE6BP35913 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDE6BP35913 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC16.27■□□□□ 0.2
PDE6BP35913 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDE6BP35913 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
PDE6BP35913 TRAF4-202ENST00000262396 683 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PDE6BP35913 PRY-201ENST00000303728 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDE6BP35913 PRY2-201ENST00000303804 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDE6BP35913 PRYP3-201ENST00000343584 1063 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PDE6BP35913 OAZ3-202ENST00000400999 890 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
PDE6BP35913 PRADC1P1-201ENST00000412317 525 ntBASIC16.27■□□□□ 0.2
PDE6BP35913 AL078621.2-201ENST00000419351 698 ntBASIC16.27■□□□□ 0.2
PDE6BP35913 LINC01494-201ENST00000419511 1011 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PDE6BP35913 AC138392.1-201ENST00000427577 921 ntBASIC16.27■□□□□ 0.2
PDE6BP35913 AC010163.1-201ENST00000434440 520 ntTSL 2 BASIC16.27■□□□□ 0.2
PDE6BP35913 AL662860.1-201ENST00000436804 877 ntTSL 5 BASIC16.27■□□□□ 0.2
PDE6BP35913 HNRNPA1P9-201ENST00000450624 950 ntBASIC16.27■□□□□ 0.2
PDE6BP35913 EEF1GP1-201ENST00000457231 1299 ntBASIC16.27■□□□□ 0.2
PDE6BP35913 AL355987.2-201ENST00000471502 561 ntTSL 4 BASIC16.27■□□□□ 0.2
PDE6BP35913 RRNAD1-204ENST00000476229 1096 ntTSL 5 BASIC16.27■□□□□ 0.2
PDE6BP35913 RN7SKP195-201ENST00000516587 303 ntBASIC16.27■□□□□ 0.2
PDE6BP35913 AC009132.1-201ENST00000565194 320 ntBASIC16.27■□□□□ 0.2
PDE6BP35913 SNHG5-211ENST00000587692 1029 ntTSL 3 BASIC16.27■□□□□ 0.2
PDE6BP35913 AC012313.2-201ENST00000599952 1154 ntTSL 5 BASIC16.27■□□□□ 0.2
PDE6BP35913 BCAS4-206ENST00000609336 787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDE6BP35913 IFI27-214ENST00000620396 599 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
PDE6BP35913 AP006621.5-202ENST00000623692 636 ntBASIC16.27■□□□□ 0.2
PDE6BP35913 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
PDE6BP35913 TTC26-207ENST00000478836 1794 ntTSL 2 BASIC16.27■□□□□ 0.2
PDE6BP35913 AMHR2-204ENST00000550311 1787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDE6BP35913 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDE6BP35913 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PDE6BP35913 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
PDE6BP35913 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PDE6BP35913 C3orf36-201ENST00000408895 1668 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
PDE6BP35913 LYRM4-205ENST00000464010 1401 ntTSL 3 BASIC16.27■□□□□ 0.19
PDE6BP35913 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PDE6BP35913 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PDE6BP35913 APTX-201ENST00000309615 1859 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PDE6BP35913 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC16.27■□□□□ 0.19
PDE6BP35913 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
PDE6BP35913 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDE6BP35913 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PDE6BP35913 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDE6BP35913 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC16.26■□□□□ 0.19
PDE6BP35913 TUBB8-207ENST00000568866 1367 ntTSL 5 BASIC16.26■□□□□ 0.19
PDE6BP35913 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PDE6BP35913 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC16.26■□□□□ 0.19
PDE6BP35913 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PDE6BP35913 FP671120.1-201ENST00000623664 2498 ntTSL 2 BASIC16.26■□□□□ 0.19
PDE6BP35913 FP236383.1-201ENST00000623860 2498 ntTSL 2 BASIC16.26■□□□□ 0.19
PDE6BP35913 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
PDE6BP35913 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDE6BP35913 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDE6BP35913 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
PDE6BP35913 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDE6BP35913 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PDE6BP35913 AC007336.3-201ENST00000623886 2160 ntBASIC16.26■□□□□ 0.19
PDE6BP35913 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
PDE6BP35913 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC16.26■□□□□ 0.19
PDE6BP35913 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC16.26■□□□□ 0.19
PDE6BP35913 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PDE6BP35913 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
PDE6BP35913 TBC1D21-201ENST00000300504 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDE6BP35913 OBP2A-203ENST00000371776 689 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDE6BP35913 IGHV1-45-201ENST00000390621 411 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
PDE6BP35913 HNRNPA1P59-201ENST00000430583 918 ntBASIC16.26■□□□□ 0.19
PDE6BP35913 OR52X1P-201ENST00000446117 914 ntBASIC16.26■□□□□ 0.19
PDE6BP35913 CHCHD2P6-201ENST00000454346 447 ntBASIC16.26■□□□□ 0.19
PDE6BP35913 AP002852.2-202ENST00000523572 592 ntTSL 4 BASIC16.26■□□□□ 0.19
PDE6BP35913 PMM2-216ENST00000569958 698 ntTSL 2 BASIC16.26■□□□□ 0.19
PDE6BP35913 CLDN6-203ENST00000572154 461 ntTSL 3 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms