Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
GPC6Q9Y625 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.83■□□□□ 0.92
GPC6Q9Y625 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.83■□□□□ 0.92
GPC6Q9Y625 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
GPC6Q9Y625 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
GPC6Q9Y625 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
GPC6Q9Y625 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GPC6Q9Y625 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GPC6Q9Y625 AC092028.1-203ENST00000608262 953 ntBASIC20.82■□□□□ 0.92
GPC6Q9Y625 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.81■□□□□ 0.92
GPC6Q9Y625 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
GPC6Q9Y625 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
GPC6Q9Y625 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GPC6Q9Y625 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GPC6Q9Y625 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GPC6Q9Y625 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
GPC6Q9Y625 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
GPC6Q9Y625 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.81■□□□□ 0.92
GPC6Q9Y625 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.81■□□□□ 0.92
GPC6Q9Y625 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GPC6Q9Y625 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.8■□□□□ 0.92
GPC6Q9Y625 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
GPC6Q9Y625 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.8■□□□□ 0.92
GPC6Q9Y625 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.8■□□□□ 0.92
GPC6Q9Y625 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.8■□□□□ 0.92
GPC6Q9Y625 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GPC6Q9Y625 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
GPC6Q9Y625 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.8■□□□□ 0.92
GPC6Q9Y625 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
GPC6Q9Y625 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
GPC6Q9Y625 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.79■□□□□ 0.92
GPC6Q9Y625 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
GPC6Q9Y625 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GPC6Q9Y625 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
GPC6Q9Y625 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.79■□□□□ 0.92
GPC6Q9Y625 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.79■□□□□ 0.92
GPC6Q9Y625 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GPC6Q9Y625 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GPC6Q9Y625 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
GPC6Q9Y625 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
GPC6Q9Y625 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GPC6Q9Y625 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
GPC6Q9Y625 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GPC6Q9Y625 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GPC6Q9Y625 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
GPC6Q9Y625 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
GPC6Q9Y625 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GPC6Q9Y625 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.78■□□□□ 0.92
GPC6Q9Y625 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.78■□□□□ 0.92
GPC6Q9Y625 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.78■□□□□ 0.92
GPC6Q9Y625 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
GPC6Q9Y625 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GPC6Q9Y625 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
GPC6Q9Y625 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.78■□□□□ 0.92
GPC6Q9Y625 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
GPC6Q9Y625 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.78■□□□□ 0.92
GPC6Q9Y625 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
GPC6Q9Y625 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GPC6Q9Y625 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
GPC6Q9Y625 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GPC6Q9Y625 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GPC6Q9Y625 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GPC6Q9Y625 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
GPC6Q9Y625 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.77■□□□□ 0.92
GPC6Q9Y625 AL353803.4-201ENST00000565882 1934 ntBASIC20.77■□□□□ 0.92
GPC6Q9Y625 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
GPC6Q9Y625 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.77■□□□□ 0.92
GPC6Q9Y625 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.77■□□□□ 0.92
GPC6Q9Y625 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
GPC6Q9Y625 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
GPC6Q9Y625 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
GPC6Q9Y625 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.77■□□□□ 0.92
GPC6Q9Y625 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.77■□□□□ 0.92
GPC6Q9Y625 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
GPC6Q9Y625 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
GPC6Q9Y625 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
GPC6Q9Y625 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GPC6Q9Y625 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GPC6Q9Y625 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.76■□□□□ 0.91
GPC6Q9Y625 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
GPC6Q9Y625 MIR6722-201ENST00000617286 78 ntBASIC20.76■□□□□ 0.91
GPC6Q9Y625 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.76■□□□□ 0.91
GPC6Q9Y625 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
GPC6Q9Y625 GUSBP5-202ENST00000510805 1989 ntBASIC20.76■□□□□ 0.91
GPC6Q9Y625 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GPC6Q9Y625 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.75■□□□□ 0.91
GPC6Q9Y625 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.75■□□□□ 0.91
GPC6Q9Y625 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GPC6Q9Y625 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.75■□□□□ 0.91
GPC6Q9Y625 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GPC6Q9Y625 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
GPC6Q9Y625 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
GPC6Q9Y625 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.75■□□□□ 0.91
GPC6Q9Y625 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
GPC6Q9Y625 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GPC6Q9Y625 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
GPC6Q9Y625 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.75■□□□□ 0.91
GPC6Q9Y625 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
GPC6Q9Y625 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
GPC6Q9Y625 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms