Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC24.65■■□□□ 1.54
SCN10AQ9Y5Y9 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC24.65■■□□□ 1.54
SCN10AQ9Y5Y9 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC24.65■■□□□ 1.54
SCN10AQ9Y5Y9 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC24.65■■□□□ 1.54
SCN10AQ9Y5Y9 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
SCN10AQ9Y5Y9 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC24.65■■□□□ 1.54
SCN10AQ9Y5Y9 MFF-208ENST00000409616 1247 ntTSL 5 BASIC24.65■■□□□ 1.54
SCN10AQ9Y5Y9 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC24.65■■□□□ 1.54
SCN10AQ9Y5Y9 AC105233.4-201ENST00000642045 216 ntBASIC24.65■■□□□ 1.54
SCN10AQ9Y5Y9 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
SCN10AQ9Y5Y9 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
SCN10AQ9Y5Y9 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
SCN10AQ9Y5Y9 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
SCN10AQ9Y5Y9 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SCN10AQ9Y5Y9 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC24.63■■□□□ 1.53
SCN10AQ9Y5Y9 AC079630.1-202ENST00000618127 1840 ntBASIC24.63■■□□□ 1.53
SCN10AQ9Y5Y9 CREM-210ENST00000374721 2020 ntTSL 5 BASIC24.63■■□□□ 1.53
SCN10AQ9Y5Y9 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SCN10AQ9Y5Y9 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
SCN10AQ9Y5Y9 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
SCN10AQ9Y5Y9 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC24.63■■□□□ 1.53
SCN10AQ9Y5Y9 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC24.63■■□□□ 1.53
SCN10AQ9Y5Y9 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC24.63■■□□□ 1.53
SCN10AQ9Y5Y9 DENND3-207ENST00000518347 850 ntTSL 2 BASIC24.63■■□□□ 1.53
SCN10AQ9Y5Y9 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC24.63■■□□□ 1.53
SCN10AQ9Y5Y9 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
SCN10AQ9Y5Y9 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SCN10AQ9Y5Y9 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SCN10AQ9Y5Y9 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
SCN10AQ9Y5Y9 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC24.62■■□□□ 1.53
SCN10AQ9Y5Y9 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
SCN10AQ9Y5Y9 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC24.62■■□□□ 1.53
SCN10AQ9Y5Y9 RAP2CP1-201ENST00000605103 478 ntBASIC24.62■■□□□ 1.53
SCN10AQ9Y5Y9 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
SCN10AQ9Y5Y9 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC24.61■■□□□ 1.53
SCN10AQ9Y5Y9 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SCN10AQ9Y5Y9 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC24.61■■□□□ 1.53
SCN10AQ9Y5Y9 LINC02228-203ENST00000641970 1355 ntBASIC24.6■■□□□ 1.53
SCN10AQ9Y5Y9 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC24.6■■□□□ 1.53
SCN10AQ9Y5Y9 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC24.6■■□□□ 1.53
SCN10AQ9Y5Y9 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
SCN10AQ9Y5Y9 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SCN10AQ9Y5Y9 AC016769.1-201ENST00000409132 1010 ntBASIC24.6■■□□□ 1.53
SCN10AQ9Y5Y9 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SCN10AQ9Y5Y9 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC24.6■■□□□ 1.53
SCN10AQ9Y5Y9 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
SCN10AQ9Y5Y9 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
SCN10AQ9Y5Y9 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SCN10AQ9Y5Y9 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
SCN10AQ9Y5Y9 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC24.59■■□□□ 1.53
SCN10AQ9Y5Y9 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
SCN10AQ9Y5Y9 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SCN10AQ9Y5Y9 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SCN10AQ9Y5Y9 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC24.59■■□□□ 1.53
SCN10AQ9Y5Y9 AC006015.1-201ENST00000429970 570 ntBASIC24.59■■□□□ 1.53
SCN10AQ9Y5Y9 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC24.59■■□□□ 1.53
SCN10AQ9Y5Y9 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SCN10AQ9Y5Y9 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
SCN10AQ9Y5Y9 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
SCN10AQ9Y5Y9 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC24.58■■□□□ 1.53
SCN10AQ9Y5Y9 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
SCN10AQ9Y5Y9 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC24.58■■□□□ 1.53
SCN10AQ9Y5Y9 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
SCN10AQ9Y5Y9 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
SCN10AQ9Y5Y9 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
SCN10AQ9Y5Y9 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC24.58■■□□□ 1.52
SCN10AQ9Y5Y9 RARA-203ENST00000394086 2008 ntTSL 2 BASIC24.58■■□□□ 1.52
SCN10AQ9Y5Y9 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC24.58■■□□□ 1.52
SCN10AQ9Y5Y9 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SCN10AQ9Y5Y9 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC24.57■■□□□ 1.52
SCN10AQ9Y5Y9 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
SCN10AQ9Y5Y9 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SCN10AQ9Y5Y9 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
SCN10AQ9Y5Y9 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC24.56■■□□□ 1.52
SCN10AQ9Y5Y9 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
SCN10AQ9Y5Y9 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
SCN10AQ9Y5Y9 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
SCN10AQ9Y5Y9 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
SCN10AQ9Y5Y9 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SCN10AQ9Y5Y9 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC24.56■■□□□ 1.52
SCN10AQ9Y5Y9 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC24.56■■□□□ 1.52
SCN10AQ9Y5Y9 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SCN10AQ9Y5Y9 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SCN10AQ9Y5Y9 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC24.55■■□□□ 1.52
SCN10AQ9Y5Y9 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
SCN10AQ9Y5Y9 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SCN10AQ9Y5Y9 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
SCN10AQ9Y5Y9 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC24.55■■□□□ 1.52
SCN10AQ9Y5Y9 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
SCN10AQ9Y5Y9 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
SCN10AQ9Y5Y9 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SCN10AQ9Y5Y9 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
SCN10AQ9Y5Y9 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SCN10AQ9Y5Y9 SHD-204ENST00000599689 1729 ntTSL 5 BASIC24.55■■□□□ 1.52
SCN10AQ9Y5Y9 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
SCN10AQ9Y5Y9 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC24.54■■□□□ 1.52
SCN10AQ9Y5Y9 GALNS-213ENST00000569433 723 ntTSL 3 BASIC24.54■■□□□ 1.52
SCN10AQ9Y5Y9 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
SCN10AQ9Y5Y9 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
SCN10AQ9Y5Y9 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC24.54■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms