Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.4■□□□□ 0.86
HRH3Q9Y5N1 AC144652.1-201ENST00000609974 1624 ntBASIC20.4■□□□□ 0.86
HRH3Q9Y5N1 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HRH3Q9Y5N1 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HRH3Q9Y5N1 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.86
HRH3Q9Y5N1 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
HRH3Q9Y5N1 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HRH3Q9Y5N1 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.85
HRH3Q9Y5N1 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
HRH3Q9Y5N1 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.39■□□□□ 0.85
HRH3Q9Y5N1 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HRH3Q9Y5N1 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.39■□□□□ 0.85
HRH3Q9Y5N1 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.39■□□□□ 0.85
HRH3Q9Y5N1 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.39■□□□□ 0.85
HRH3Q9Y5N1 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HRH3Q9Y5N1 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HRH3Q9Y5N1 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HRH3Q9Y5N1 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HRH3Q9Y5N1 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.38■□□□□ 0.85
HRH3Q9Y5N1 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HRH3Q9Y5N1 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
HRH3Q9Y5N1 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.38■□□□□ 0.85
HRH3Q9Y5N1 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
HRH3Q9Y5N1 MIR3181-201ENST00000578512 73 ntBASIC20.38■□□□□ 0.85
HRH3Q9Y5N1 AC092171.4-201ENST00000609130 632 ntBASIC20.38■□□□□ 0.85
HRH3Q9Y5N1 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.38■□□□□ 0.85
HRH3Q9Y5N1 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HRH3Q9Y5N1 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
HRH3Q9Y5N1 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HRH3Q9Y5N1 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HRH3Q9Y5N1 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.37■□□□□ 0.85
HRH3Q9Y5N1 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HRH3Q9Y5N1 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
HRH3Q9Y5N1 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.37■□□□□ 0.85
HRH3Q9Y5N1 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
HRH3Q9Y5N1 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HRH3Q9Y5N1 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
HRH3Q9Y5N1 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.36■□□□□ 0.85
HRH3Q9Y5N1 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HRH3Q9Y5N1 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HRH3Q9Y5N1 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HRH3Q9Y5N1 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
HRH3Q9Y5N1 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.36■□□□□ 0.85
HRH3Q9Y5N1 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HRH3Q9Y5N1 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.36■□□□□ 0.85
HRH3Q9Y5N1 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
HRH3Q9Y5N1 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.36■□□□□ 0.85
HRH3Q9Y5N1 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.36■□□□□ 0.85
HRH3Q9Y5N1 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.36■□□□□ 0.85
HRH3Q9Y5N1 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
HRH3Q9Y5N1 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HRH3Q9Y5N1 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.35■□□□□ 0.85
HRH3Q9Y5N1 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
HRH3Q9Y5N1 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.35■□□□□ 0.85
HRH3Q9Y5N1 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
HRH3Q9Y5N1 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HRH3Q9Y5N1 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
HRH3Q9Y5N1 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.35■□□□□ 0.85
HRH3Q9Y5N1 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HRH3Q9Y5N1 AC091305.1-201ENST00000479476 895 ntBASIC20.35■□□□□ 0.85
HRH3Q9Y5N1 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.35■□□□□ 0.85
HRH3Q9Y5N1 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.35■□□□□ 0.85
HRH3Q9Y5N1 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
HRH3Q9Y5N1 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.35■□□□□ 0.85
HRH3Q9Y5N1 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
HRH3Q9Y5N1 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.35■□□□□ 0.85
HRH3Q9Y5N1 AL353803.4-201ENST00000565882 1934 ntBASIC20.35■□□□□ 0.85
HRH3Q9Y5N1 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.35■□□□□ 0.85
HRH3Q9Y5N1 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HRH3Q9Y5N1 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.34■□□□□ 0.85
HRH3Q9Y5N1 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
HRH3Q9Y5N1 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
HRH3Q9Y5N1 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HRH3Q9Y5N1 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
HRH3Q9Y5N1 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HRH3Q9Y5N1 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HRH3Q9Y5N1 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.34■□□□□ 0.85
HRH3Q9Y5N1 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HRH3Q9Y5N1 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HRH3Q9Y5N1 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HRH3Q9Y5N1 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HRH3Q9Y5N1 pRNA.6-201ENST00000610482 90 ntBASIC20.34■□□□□ 0.85
HRH3Q9Y5N1 CA15P2-201ENST00000611168 834 ntBASIC20.34■□□□□ 0.85
HRH3Q9Y5N1 pRNA.5-201ENST00000612139 90 ntBASIC20.34■□□□□ 0.85
HRH3Q9Y5N1 AC092666.2-201ENST00000613287 246 ntBASIC20.34■□□□□ 0.85
HRH3Q9Y5N1 pRNA.11-201ENST00000618423 90 ntBASIC20.34■□□□□ 0.85
HRH3Q9Y5N1 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HRH3Q9Y5N1 pRNA.13-201ENST00000619112 90 ntBASIC20.34■□□□□ 0.85
HRH3Q9Y5N1 AC241377.3-202ENST00000626088 1088 ntBASIC20.34■□□□□ 0.85
HRH3Q9Y5N1 AC241585.3-202ENST00000628937 1088 ntBASIC20.34■□□□□ 0.85
HRH3Q9Y5N1 AC245100.8-202ENST00000629247 1058 ntBASIC20.34■□□□□ 0.85
HRH3Q9Y5N1 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HRH3Q9Y5N1 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
HRH3Q9Y5N1 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HRH3Q9Y5N1 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HRH3Q9Y5N1 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.33■□□□□ 0.85
HRH3Q9Y5N1 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HRH3Q9Y5N1 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HRH3Q9Y5N1 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.33■□□□□ 0.85
HRH3Q9Y5N1 DUX4L4-201ENST00000566884 1269 ntBASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms