Protein–RNA interactions for Protein: Q9UPU9

SAMD4A, Protein Smaug homolog 1, humanhuman

Known RBP Predictions only

Length 718 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD4AQ9UPU9 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
SAMD4AQ9UPU9 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SAMD4AQ9UPU9 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SAMD4AQ9UPU9 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
SAMD4AQ9UPU9 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SAMD4AQ9UPU9 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
SAMD4AQ9UPU9 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SAMD4AQ9UPU9 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SAMD4AQ9UPU9 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SAMD4AQ9UPU9 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SAMD4AQ9UPU9 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.69■□□□□ 0.9
SAMD4AQ9UPU9 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.69■□□□□ 0.9
SAMD4AQ9UPU9 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
SAMD4AQ9UPU9 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SAMD4AQ9UPU9 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SAMD4AQ9UPU9 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.68■□□□□ 0.9
SAMD4AQ9UPU9 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SAMD4AQ9UPU9 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.68■□□□□ 0.9
SAMD4AQ9UPU9 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
SAMD4AQ9UPU9 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SAMD4AQ9UPU9 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SAMD4AQ9UPU9 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SAMD4AQ9UPU9 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SAMD4AQ9UPU9 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SAMD4AQ9UPU9 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.68■□□□□ 0.9
SAMD4AQ9UPU9 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SAMD4AQ9UPU9 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
SAMD4AQ9UPU9 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SAMD4AQ9UPU9 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.67■□□□□ 0.9
SAMD4AQ9UPU9 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SAMD4AQ9UPU9 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.67■□□□□ 0.9
SAMD4AQ9UPU9 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.67■□□□□ 0.9
SAMD4AQ9UPU9 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SAMD4AQ9UPU9 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
SAMD4AQ9UPU9 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
SAMD4AQ9UPU9 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SAMD4AQ9UPU9 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
SAMD4AQ9UPU9 FBXW4P1-201ENST00000426721 2239 ntBASIC20.67■□□□□ 0.9
SAMD4AQ9UPU9 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SAMD4AQ9UPU9 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
SAMD4AQ9UPU9 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SAMD4AQ9UPU9 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SAMD4AQ9UPU9 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SAMD4AQ9UPU9 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SAMD4AQ9UPU9 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SAMD4AQ9UPU9 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SAMD4AQ9UPU9 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SAMD4AQ9UPU9 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
SAMD4AQ9UPU9 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SAMD4AQ9UPU9 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SAMD4AQ9UPU9 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SAMD4AQ9UPU9 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SAMD4AQ9UPU9 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SAMD4AQ9UPU9 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SAMD4AQ9UPU9 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.65■□□□□ 0.9
SAMD4AQ9UPU9 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.65■□□□□ 0.9
SAMD4AQ9UPU9 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SAMD4AQ9UPU9 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SAMD4AQ9UPU9 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SAMD4AQ9UPU9 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SAMD4AQ9UPU9 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.65■□□□□ 0.9
SAMD4AQ9UPU9 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SAMD4AQ9UPU9 AL137060.1-201ENST00000618151 2648 ntBASIC20.65■□□□□ 0.9
SAMD4AQ9UPU9 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SAMD4AQ9UPU9 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SAMD4AQ9UPU9 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SAMD4AQ9UPU9 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SAMD4AQ9UPU9 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
SAMD4AQ9UPU9 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.64■□□□□ 0.9
SAMD4AQ9UPU9 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
SAMD4AQ9UPU9 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SAMD4AQ9UPU9 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SAMD4AQ9UPU9 DUX4L18-201ENST00000553347 1267 ntBASIC20.64■□□□□ 0.89
SAMD4AQ9UPU9 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.64■□□□□ 0.89
SAMD4AQ9UPU9 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
SAMD4AQ9UPU9 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SAMD4AQ9UPU9 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SAMD4AQ9UPU9 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
SAMD4AQ9UPU9 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SAMD4AQ9UPU9 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SAMD4AQ9UPU9 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.63■□□□□ 0.89
SAMD4AQ9UPU9 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SAMD4AQ9UPU9 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.63■□□□□ 0.89
SAMD4AQ9UPU9 BHLHE23-202ENST00000612929 1109 ntBASIC20.63■□□□□ 0.89
SAMD4AQ9UPU9 AC074183.2-201ENST00000623112 922 ntBASIC20.63■□□□□ 0.89
SAMD4AQ9UPU9 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SAMD4AQ9UPU9 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SAMD4AQ9UPU9 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SAMD4AQ9UPU9 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.63■□□□□ 0.89
SAMD4AQ9UPU9 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.63■□□□□ 0.89
SAMD4AQ9UPU9 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SAMD4AQ9UPU9 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SAMD4AQ9UPU9 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SAMD4AQ9UPU9 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.62■□□□□ 0.89
SAMD4AQ9UPU9 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
SAMD4AQ9UPU9 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.62■□□□□ 0.89
SAMD4AQ9UPU9 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.62■□□□□ 0.89
SAMD4AQ9UPU9 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SAMD4AQ9UPU9 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SAMD4AQ9UPU9 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms