Protein–RNA interactions for Protein: Q9HD33

MRPL47, 39S ribosomal protein L47, mitochondrial, humanhuman

Known RBP Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL47Q9HD33 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
MRPL47Q9HD33 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
MRPL47Q9HD33 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
MRPL47Q9HD33 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC23.34■■□□□ 1.33
MRPL47Q9HD33 KRT16P3-201ENST00000439127 1283 ntBASIC23.34■■□□□ 1.33
MRPL47Q9HD33 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC23.34■■□□□ 1.33
MRPL47Q9HD33 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.34■■□□□ 1.33
MRPL47Q9HD33 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC23.34■■□□□ 1.33
MRPL47Q9HD33 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
MRPL47Q9HD33 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC23.34■■□□□ 1.33
MRPL47Q9HD33 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC23.33■■□□□ 1.33
MRPL47Q9HD33 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
MRPL47Q9HD33 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
MRPL47Q9HD33 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
MRPL47Q9HD33 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC23.33■■□□□ 1.33
MRPL47Q9HD33 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC23.33■■□□□ 1.33
MRPL47Q9HD33 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC23.33■■□□□ 1.33
MRPL47Q9HD33 ECEL1P1-201ENST00000373592 1742 ntBASIC23.33■■□□□ 1.32
MRPL47Q9HD33 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.33■■□□□ 1.32
MRPL47Q9HD33 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23.33■■□□□ 1.32
MRPL47Q9HD33 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
MRPL47Q9HD33 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
MRPL47Q9HD33 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
MRPL47Q9HD33 AC242852.2-201ENST00000615738 1807 ntBASIC23.32■■□□□ 1.32
MRPL47Q9HD33 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC23.32■■□□□ 1.32
MRPL47Q9HD33 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
MRPL47Q9HD33 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
MRPL47Q9HD33 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.31■■□□□ 1.32
MRPL47Q9HD33 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
MRPL47Q9HD33 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
MRPL47Q9HD33 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.31■■□□□ 1.32
MRPL47Q9HD33 AL117332.1-201ENST00000622628 974 ntBASIC23.31■■□□□ 1.32
MRPL47Q9HD33 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
MRPL47Q9HD33 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
MRPL47Q9HD33 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
MRPL47Q9HD33 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
MRPL47Q9HD33 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
MRPL47Q9HD33 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
MRPL47Q9HD33 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC23.3■■□□□ 1.32
MRPL47Q9HD33 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
MRPL47Q9HD33 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
MRPL47Q9HD33 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
MRPL47Q9HD33 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
MRPL47Q9HD33 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
MRPL47Q9HD33 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
MRPL47Q9HD33 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
MRPL47Q9HD33 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.29■■□□□ 1.32
MRPL47Q9HD33 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC23.29■■□□□ 1.32
MRPL47Q9HD33 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
MRPL47Q9HD33 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
MRPL47Q9HD33 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC23.29■■□□□ 1.32
MRPL47Q9HD33 GUSBP5-201ENST00000418136 578 ntBASIC23.29■■□□□ 1.32
MRPL47Q9HD33 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
MRPL47Q9HD33 AK3-203ENST00000447596 705 ntTSL 2 BASIC23.29■■□□□ 1.32
MRPL47Q9HD33 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC23.29■■□□□ 1.32
MRPL47Q9HD33 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC23.29■■□□□ 1.32
MRPL47Q9HD33 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC23.29■■□□□ 1.32
MRPL47Q9HD33 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
MRPL47Q9HD33 LINC00526-201ENST00000581067 1875 ntBASIC23.28■■□□□ 1.32
MRPL47Q9HD33 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
MRPL47Q9HD33 EP400NL-214ENST00000641289 2402 ntBASIC23.28■■□□□ 1.32
MRPL47Q9HD33 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
MRPL47Q9HD33 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
MRPL47Q9HD33 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
MRPL47Q9HD33 TRIR-205ENST00000592273 783 ntTSL 3 BASIC23.28■■□□□ 1.32
MRPL47Q9HD33 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.28■■□□□ 1.32
MRPL47Q9HD33 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
MRPL47Q9HD33 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
MRPL47Q9HD33 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
MRPL47Q9HD33 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC23.28■■□□□ 1.32
MRPL47Q9HD33 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC23.28■■□□□ 1.32
MRPL47Q9HD33 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
MRPL47Q9HD33 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
MRPL47Q9HD33 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
MRPL47Q9HD33 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
MRPL47Q9HD33 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC23.27■■□□□ 1.32
MRPL47Q9HD33 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC23.27■■□□□ 1.32
MRPL47Q9HD33 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
MRPL47Q9HD33 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
MRPL47Q9HD33 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
MRPL47Q9HD33 AC087742.1-201ENST00000575880 1738 ntBASIC23.27■■□□□ 1.32
MRPL47Q9HD33 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC23.27■■□□□ 1.32
MRPL47Q9HD33 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
MRPL47Q9HD33 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC23.27■■□□□ 1.31
MRPL47Q9HD33 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC23.27■■□□□ 1.31
MRPL47Q9HD33 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
MRPL47Q9HD33 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
MRPL47Q9HD33 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
MRPL47Q9HD33 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC23.26■■□□□ 1.31
MRPL47Q9HD33 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC23.26■■□□□ 1.31
MRPL47Q9HD33 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC23.26■■□□□ 1.31
MRPL47Q9HD33 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
MRPL47Q9HD33 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
MRPL47Q9HD33 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
MRPL47Q9HD33 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
MRPL47Q9HD33 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
MRPL47Q9HD33 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
MRPL47Q9HD33 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
MRPL47Q9HD33 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
MRPL47Q9HD33 LSR-203ENST00000360798 1963 ntTSL 2 BASIC23.25■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms