Protein–RNA interactions for Protein: Q9HBD1

RC3H2, Roquin-2, humanhuman

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2Q9HBD1 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC23.92■■□□□ 1.42
RC3H2Q9HBD1 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RC3H2Q9HBD1 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RC3H2Q9HBD1 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC23.92■■□□□ 1.42
RC3H2Q9HBD1 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
RC3H2Q9HBD1 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
RC3H2Q9HBD1 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RC3H2Q9HBD1 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RC3H2Q9HBD1 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
RC3H2Q9HBD1 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RC3H2Q9HBD1 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC23.91■■□□□ 1.42
RC3H2Q9HBD1 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC23.91■■□□□ 1.42
RC3H2Q9HBD1 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC23.91■■□□□ 1.42
RC3H2Q9HBD1 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC23.91■■□□□ 1.42
RC3H2Q9HBD1 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
RC3H2Q9HBD1 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC23.91■■□□□ 1.42
RC3H2Q9HBD1 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RC3H2Q9HBD1 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RC3H2Q9HBD1 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
RC3H2Q9HBD1 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
RC3H2Q9HBD1 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
RC3H2Q9HBD1 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
RC3H2Q9HBD1 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC23.9■■□□□ 1.42
RC3H2Q9HBD1 CDCA4P2-201ENST00000441182 718 ntBASIC23.9■■□□□ 1.42
RC3H2Q9HBD1 TK2-208ENST00000545043 1120 ntTSL 2 BASIC23.9■■□□□ 1.42
RC3H2Q9HBD1 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC23.9■■□□□ 1.42
RC3H2Q9HBD1 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC23.9■■□□□ 1.42
RC3H2Q9HBD1 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC23.9■■□□□ 1.42
RC3H2Q9HBD1 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC23.9■■□□□ 1.42
RC3H2Q9HBD1 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RC3H2Q9HBD1 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
RC3H2Q9HBD1 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.89■■□□□ 1.42
RC3H2Q9HBD1 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
RC3H2Q9HBD1 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
RC3H2Q9HBD1 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RC3H2Q9HBD1 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC23.89■■□□□ 1.41
RC3H2Q9HBD1 HSCB-202ENST00000398941 955 ntTSL 2 BASIC23.89■■□□□ 1.41
RC3H2Q9HBD1 GALNS-213ENST00000569433 723 ntTSL 3 BASIC23.89■■□□□ 1.41
RC3H2Q9HBD1 AC073111.5-205ENST00000641717 521 ntBASIC23.89■■□□□ 1.41
RC3H2Q9HBD1 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RC3H2Q9HBD1 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RC3H2Q9HBD1 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RC3H2Q9HBD1 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RC3H2Q9HBD1 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
RC3H2Q9HBD1 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RC3H2Q9HBD1 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC23.88■■□□□ 1.41
RC3H2Q9HBD1 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
RC3H2Q9HBD1 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RC3H2Q9HBD1 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RC3H2Q9HBD1 STX7-201ENST00000367937 1090 ntTSL 5 BASIC23.88■■□□□ 1.41
RC3H2Q9HBD1 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
RC3H2Q9HBD1 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RC3H2Q9HBD1 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
RC3H2Q9HBD1 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RC3H2Q9HBD1 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RC3H2Q9HBD1 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.87■■□□□ 1.41
RC3H2Q9HBD1 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RC3H2Q9HBD1 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RC3H2Q9HBD1 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RC3H2Q9HBD1 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC23.87■■□□□ 1.41
RC3H2Q9HBD1 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
RC3H2Q9HBD1 SHD-204ENST00000599689 1729 ntTSL 5 BASIC23.87■■□□□ 1.41
RC3H2Q9HBD1 AP004607.4-201ENST00000530158 1459 ntBASIC23.87■■□□□ 1.41
RC3H2Q9HBD1 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RC3H2Q9HBD1 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC23.86■■□□□ 1.41
RC3H2Q9HBD1 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC23.86■■□□□ 1.41
RC3H2Q9HBD1 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
RC3H2Q9HBD1 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC23.86■■□□□ 1.41
RC3H2Q9HBD1 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
RC3H2Q9HBD1 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC23.86■■□□□ 1.41
RC3H2Q9HBD1 GAS2L1P2-201ENST00000436355 1356 ntBASIC23.86■■□□□ 1.41
RC3H2Q9HBD1 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
RC3H2Q9HBD1 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
RC3H2Q9HBD1 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RC3H2Q9HBD1 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
RC3H2Q9HBD1 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RC3H2Q9HBD1 AC137761.2-201ENST00000561729 223 ntBASIC23.85■■□□□ 1.41
RC3H2Q9HBD1 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC23.85■■□□□ 1.41
RC3H2Q9HBD1 AC145350.3-201ENST00000569033 163 ntBASIC23.85■■□□□ 1.41
RC3H2Q9HBD1 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RC3H2Q9HBD1 AC004854.2-201ENST00000608450 1441 ntBASIC23.84■■□□□ 1.41
RC3H2Q9HBD1 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
RC3H2Q9HBD1 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RC3H2Q9HBD1 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RC3H2Q9HBD1 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
RC3H2Q9HBD1 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
RC3H2Q9HBD1 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC23.84■■□□□ 1.41
RC3H2Q9HBD1 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RC3H2Q9HBD1 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC23.84■■□□□ 1.41
RC3H2Q9HBD1 DBI-210ENST00000542275 757 ntTSL 5 BASIC23.84■■□□□ 1.41
RC3H2Q9HBD1 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC23.84■■□□□ 1.41
RC3H2Q9HBD1 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC23.84■■□□□ 1.41
RC3H2Q9HBD1 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RC3H2Q9HBD1 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
RC3H2Q9HBD1 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RC3H2Q9HBD1 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RC3H2Q9HBD1 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
RC3H2Q9HBD1 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC23.83■■□□□ 1.41
RC3H2Q9HBD1 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC23.83■■□□□ 1.41
RC3H2Q9HBD1 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms