Protein–RNA interactions for Protein: Q9H2H9

SLC38A1, Sodium-coupled neutral amino acid transporter 1, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1Q9H2H9 MIR6724-4-201ENST00000617390 92 ntBASIC20.52■□□□□ 0.88
SLC38A1Q9H2H9 MIR6724-3-201ENST00000622482 92 ntBASIC20.52■□□□□ 0.88
SLC38A1Q9H2H9 AL035685.1-201ENST00000636663 812 ntBASIC20.52■□□□□ 0.88
SLC38A1Q9H2H9 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
SLC38A1Q9H2H9 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC38A1Q9H2H9 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC38A1Q9H2H9 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
SLC38A1Q9H2H9 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
SLC38A1Q9H2H9 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.87
SLC38A1Q9H2H9 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC38A1Q9H2H9 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SLC38A1Q9H2H9 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SLC38A1Q9H2H9 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC38A1Q9H2H9 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
SLC38A1Q9H2H9 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC38A1Q9H2H9 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SLC38A1Q9H2H9 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC38A1Q9H2H9 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC38A1Q9H2H9 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC38A1Q9H2H9 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
SLC38A1Q9H2H9 AC087742.1-201ENST00000575880 1738 ntBASIC20.5■□□□□ 0.87
SLC38A1Q9H2H9 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.5■□□□□ 0.87
SLC38A1Q9H2H9 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC38A1Q9H2H9 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC38A1Q9H2H9 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.5■□□□□ 0.87
SLC38A1Q9H2H9 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.5■□□□□ 0.87
SLC38A1Q9H2H9 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.5■□□□□ 0.87
SLC38A1Q9H2H9 AC009086.3-201ENST00000623486 1008 ntBASIC20.5■□□□□ 0.87
SLC38A1Q9H2H9 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SLC38A1Q9H2H9 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC38A1Q9H2H9 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
SLC38A1Q9H2H9 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.5■□□□□ 0.87
SLC38A1Q9H2H9 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC38A1Q9H2H9 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
SLC38A1Q9H2H9 AC242852.2-201ENST00000615738 1807 ntBASIC20.5■□□□□ 0.87
SLC38A1Q9H2H9 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SLC38A1Q9H2H9 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SLC38A1Q9H2H9 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.5■□□□□ 0.87
SLC38A1Q9H2H9 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC38A1Q9H2H9 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
SLC38A1Q9H2H9 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLC38A1Q9H2H9 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLC38A1Q9H2H9 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
SLC38A1Q9H2H9 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.49■□□□□ 0.87
SLC38A1Q9H2H9 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.49■□□□□ 0.87
SLC38A1Q9H2H9 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLC38A1Q9H2H9 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLC38A1Q9H2H9 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLC38A1Q9H2H9 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLC38A1Q9H2H9 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.49■□□□□ 0.87
SLC38A1Q9H2H9 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SLC38A1Q9H2H9 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SLC38A1Q9H2H9 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.48■□□□□ 0.87
SLC38A1Q9H2H9 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC38A1Q9H2H9 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
SLC38A1Q9H2H9 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC38A1Q9H2H9 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
SLC38A1Q9H2H9 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.48■□□□□ 0.87
SLC38A1Q9H2H9 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.48■□□□□ 0.87
SLC38A1Q9H2H9 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SLC38A1Q9H2H9 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
SLC38A1Q9H2H9 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.47■□□□□ 0.87
SLC38A1Q9H2H9 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.47■□□□□ 0.87
SLC38A1Q9H2H9 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC38A1Q9H2H9 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC38A1Q9H2H9 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC38A1Q9H2H9 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC38A1Q9H2H9 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.47■□□□□ 0.87
SLC38A1Q9H2H9 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SLC38A1Q9H2H9 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
SLC38A1Q9H2H9 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC38A1Q9H2H9 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
SLC38A1Q9H2H9 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC38A1Q9H2H9 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC38A1Q9H2H9 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
SLC38A1Q9H2H9 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.46■□□□□ 0.87
SLC38A1Q9H2H9 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SLC38A1Q9H2H9 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.46■□□□□ 0.87
SLC38A1Q9H2H9 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SLC38A1Q9H2H9 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC38A1Q9H2H9 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC38A1Q9H2H9 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SLC38A1Q9H2H9 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC38A1Q9H2H9 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC38A1Q9H2H9 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.45■□□□□ 0.86
SLC38A1Q9H2H9 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC38A1Q9H2H9 GUSBP5-201ENST00000418136 578 ntBASIC20.45■□□□□ 0.86
SLC38A1Q9H2H9 KRT16P3-201ENST00000439127 1283 ntBASIC20.45■□□□□ 0.86
SLC38A1Q9H2H9 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC38A1Q9H2H9 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC38A1Q9H2H9 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC38A1Q9H2H9 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.45■□□□□ 0.86
SLC38A1Q9H2H9 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SLC38A1Q9H2H9 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SLC38A1Q9H2H9 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
SLC38A1Q9H2H9 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.44■□□□□ 0.86
SLC38A1Q9H2H9 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
SLC38A1Q9H2H9 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.44■□□□□ 0.86
SLC38A1Q9H2H9 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
SLC38A1Q9H2H9 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms