Protein–RNA interactions for Protein: Q99942

RNF5, E3 ubiquitin-protein ligase RNF5, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF5Q99942 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC17.71■□□□□ 0.43
RNF5Q99942 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF5Q99942 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
RNF5Q99942 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF5Q99942 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF5Q99942 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC17.7■□□□□ 0.42
RNF5Q99942 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF5Q99942 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC17.7■□□□□ 0.42
RNF5Q99942 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
RNF5Q99942 AL512631.2-201ENST00000604634 923 ntBASIC17.7■□□□□ 0.42
RNF5Q99942 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC17.7■□□□□ 0.42
RNF5Q99942 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF5Q99942 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC17.7■□□□□ 0.42
RNF5Q99942 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF5Q99942 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF5Q99942 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF5Q99942 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF5Q99942 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF5Q99942 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
RNF5Q99942 C1orf229-201ENST00000623686 2258 ntBASIC17.69■□□□□ 0.42
RNF5Q99942 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF5Q99942 AC133561.1-201ENST00000568600 2415 ntBASIC17.69■□□□□ 0.42
RNF5Q99942 AC127496.7-201ENST00000625110 1798 ntBASIC17.69■□□□□ 0.42
RNF5Q99942 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC17.69■□□□□ 0.42
RNF5Q99942 GTSE1-AS1-202ENST00000623117 1518 ntBASIC17.69■□□□□ 0.42
RNF5Q99942 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF5Q99942 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RNF5Q99942 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RNF5Q99942 AC099791.2-201ENST00000605725 427 ntBASIC17.69■□□□□ 0.42
RNF5Q99942 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC17.69■□□□□ 0.42
RNF5Q99942 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC17.69■□□□□ 0.42
RNF5Q99942 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC17.69■□□□□ 0.42
RNF5Q99942 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF5Q99942 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF5Q99942 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF5Q99942 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF5Q99942 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RNF5Q99942 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF5Q99942 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC17.68■□□□□ 0.42
RNF5Q99942 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RNF5Q99942 GALC-202ENST00000393568 2054 ntTSL 2 BASIC17.68■□□□□ 0.42
RNF5Q99942 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
RNF5Q99942 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC17.68■□□□□ 0.42
RNF5Q99942 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RNF5Q99942 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC17.68■□□□□ 0.42
RNF5Q99942 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF5Q99942 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF5Q99942 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
RNF5Q99942 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF5Q99942 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC17.67■□□□□ 0.42
RNF5Q99942 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF5Q99942 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF5Q99942 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF5Q99942 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF5Q99942 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
RNF5Q99942 QDPR-206ENST00000508623 601 ntTSL 3 BASIC17.67■□□□□ 0.42
RNF5Q99942 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC17.67■□□□□ 0.42
RNF5Q99942 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC17.67■□□□□ 0.42
RNF5Q99942 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF5Q99942 AL138724.1-201ENST00000606771 1088 ntBASIC17.67■□□□□ 0.42
RNF5Q99942 AC233723.2-201ENST00000623798 2106 ntBASIC17.67■□□□□ 0.42
RNF5Q99942 RASSF1-AS1-201ENST00000629828 790 ntBASIC17.67■□□□□ 0.42
RNF5Q99942 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF5Q99942 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
RNF5Q99942 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC17.67■□□□□ 0.42
RNF5Q99942 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF5Q99942 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
RNF5Q99942 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
RNF5Q99942 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF5Q99942 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF5Q99942 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC17.66■□□□□ 0.42
RNF5Q99942 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
RNF5Q99942 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RNF5Q99942 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF5Q99942 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF5Q99942 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF5Q99942 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RNF5Q99942 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC17.66■□□□□ 0.42
RNF5Q99942 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC17.66■□□□□ 0.42
RNF5Q99942 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
RNF5Q99942 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC17.66■□□□□ 0.42
RNF5Q99942 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RNF5Q99942 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF5Q99942 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF5Q99942 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF5Q99942 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RNF5Q99942 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RNF5Q99942 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC17.65■□□□□ 0.42
RNF5Q99942 AC004687.1-201ENST00000579003 1625 ntBASIC17.65■□□□□ 0.42
RNF5Q99942 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RNF5Q99942 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
RNF5Q99942 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF5Q99942 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC17.65■□□□□ 0.42
RNF5Q99942 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RNF5Q99942 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RNF5Q99942 pRNA.6-201ENST00000610482 90 ntBASIC17.65■□□□□ 0.42
RNF5Q99942 pRNA.5-201ENST00000612139 90 ntBASIC17.65■□□□□ 0.42
RNF5Q99942 pRNA.11-201ENST00000618423 90 ntBASIC17.65■□□□□ 0.42
RNF5Q99942 pRNA.13-201ENST00000619112 90 ntBASIC17.65■□□□□ 0.42
RNF5Q99942 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms