Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC30.09■■■□□ 2.41
ABCA3Q99758 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC30.08■■■□□ 2.41
ABCA3Q99758 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC30.08■■■□□ 2.41
ABCA3Q99758 CD99P1-205ENST00000527459 561 ntBASIC30.08■■■□□ 2.41
ABCA3Q99758 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
ABCA3Q99758 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC30.08■■■□□ 2.41
ABCA3Q99758 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
ABCA3Q99758 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC30.08■■■□□ 2.41
ABCA3Q99758 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC30.08■■■□□ 2.41
ABCA3Q99758 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC30.08■■■□□ 2.41
ABCA3Q99758 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC30.08■■■□□ 2.41
ABCA3Q99758 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC30.08■■■□□ 2.41
ABCA3Q99758 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC30.08■■■□□ 2.41
ABCA3Q99758 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
ABCA3Q99758 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
ABCA3Q99758 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC30.07■■■□□ 2.4
ABCA3Q99758 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC30.07■■■□□ 2.4
ABCA3Q99758 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC30.07■■■□□ 2.4
ABCA3Q99758 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC30.07■■■□□ 2.4
ABCA3Q99758 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
ABCA3Q99758 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC30.07■■■□□ 2.4
ABCA3Q99758 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
ABCA3Q99758 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
ABCA3Q99758 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
ABCA3Q99758 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
ABCA3Q99758 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC30.06■■■□□ 2.4
ABCA3Q99758 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
ABCA3Q99758 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
ABCA3Q99758 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC30.06■■■□□ 2.4
ABCA3Q99758 AC098934.4-201ENST00000564127 592 ntBASIC30.06■■■□□ 2.4
ABCA3Q99758 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC30.06■■■□□ 2.4
ABCA3Q99758 FP325331.1-202ENST00000623531 1380 ntBASIC30.05■■■□□ 2.4
ABCA3Q99758 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC30.05■■■□□ 2.4
ABCA3Q99758 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC30.05■■■□□ 2.4
ABCA3Q99758 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC30.05■■■□□ 2.4
ABCA3Q99758 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC30.05■■■□□ 2.4
ABCA3Q99758 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC30.05■■■□□ 2.4
ABCA3Q99758 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC30.05■■■□□ 2.4
ABCA3Q99758 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC30.05■■■□□ 2.4
ABCA3Q99758 METTL15-202ENST00000403099 795 ntTSL 5 BASIC30.05■■■□□ 2.4
ABCA3Q99758 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC30.05■■■□□ 2.4
ABCA3Q99758 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC30.05■■■□□ 2.4
ABCA3Q99758 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC30.05■■■□□ 2.4
ABCA3Q99758 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
ABCA3Q99758 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
ABCA3Q99758 STX4-202ENST00000394998 1498 ntTSL 2 BASIC30.04■■■□□ 2.4
ABCA3Q99758 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC30.04■■■□□ 2.4
ABCA3Q99758 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
ABCA3Q99758 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC30.04■■■□□ 2.4
ABCA3Q99758 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC30.04■■■□□ 2.4
ABCA3Q99758 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC30.04■■■□□ 2.4
ABCA3Q99758 RARA-203ENST00000394086 2008 ntTSL 2 BASIC30.04■■■□□ 2.4
ABCA3Q99758 AC144652.1-201ENST00000609974 1624 ntBASIC30.03■■■□□ 2.4
ABCA3Q99758 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC30.03■■■□□ 2.4
ABCA3Q99758 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
ABCA3Q99758 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
ABCA3Q99758 KRT18P6-201ENST00000555540 1265 ntBASIC30.03■■■□□ 2.4
ABCA3Q99758 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
ABCA3Q99758 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
ABCA3Q99758 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
ABCA3Q99758 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC30.02■■■□□ 2.4
ABCA3Q99758 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
ABCA3Q99758 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC30.02■■■□□ 2.4
ABCA3Q99758 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC30.02■■■□□ 2.4
ABCA3Q99758 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC30.02■■■□□ 2.4
ABCA3Q99758 METTL26-203ENST00000397664 604 ntTSL 2 BASIC30.02■■■□□ 2.4
ABCA3Q99758 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC30.02■■■□□ 2.4
ABCA3Q99758 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
ABCA3Q99758 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC30.01■■■□□ 2.39
ABCA3Q99758 SPI1-203ENST00000533030 661 ntTSL 2 BASIC30.01■■■□□ 2.39
ABCA3Q99758 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC30.01■■■□□ 2.39
ABCA3Q99758 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC30.01■■■□□ 2.39
ABCA3Q99758 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
ABCA3Q99758 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC30.01■■■□□ 2.39
ABCA3Q99758 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC30.01■■■□□ 2.39
ABCA3Q99758 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC30■■■□□ 2.39
ABCA3Q99758 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC30■■■□□ 2.39
ABCA3Q99758 GPX1P1-201ENST00000388829 606 ntBASIC30■■■□□ 2.39
ABCA3Q99758 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC30■■■□□ 2.39
ABCA3Q99758 KRT18P11-201ENST00000435214 1283 ntBASIC30■■■□□ 2.39
ABCA3Q99758 TSPY20P-201ENST00000450910 630 ntBASIC30■■■□□ 2.39
ABCA3Q99758 AC011767.1-201ENST00000617410 1153 ntBASIC30■■■□□ 2.39
ABCA3Q99758 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
ABCA3Q99758 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC29.99■■■□□ 2.39
ABCA3Q99758 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
ABCA3Q99758 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC29.99■■■□□ 2.39
ABCA3Q99758 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
ABCA3Q99758 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC29.99■■■□□ 2.39
ABCA3Q99758 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC29.99■■■□□ 2.39
ABCA3Q99758 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC29.99■■■□□ 2.39
ABCA3Q99758 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
ABCA3Q99758 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC29.99■■■□□ 2.39
ABCA3Q99758 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC29.98■■■□□ 2.39
ABCA3Q99758 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
ABCA3Q99758 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC29.98■■■□□ 2.39
ABCA3Q99758 MAZ-216ENST00000616501 991 ntTSL 5 BASIC29.98■■■□□ 2.39
ABCA3Q99758 BX005040.4-201ENST00000637145 1518 ntBASIC29.98■■■□□ 2.39
ABCA3Q99758 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC29.97■■■□□ 2.39
ABCA3Q99758 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC29.97■■■□□ 2.39
ABCA3Q99758 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms