Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHB18PQ96TA0 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHB18PQ96TA0 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC23.55■■□□□ 1.36
PCDHB18PQ96TA0 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHB18PQ96TA0 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHB18PQ96TA0 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHB18PQ96TA0 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHB18PQ96TA0 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHB18PQ96TA0 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHB18PQ96TA0 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
PCDHB18PQ96TA0 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC23.55■■□□□ 1.36
PCDHB18PQ96TA0 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.55■■□□□ 1.36
PCDHB18PQ96TA0 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
PCDHB18PQ96TA0 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHB18PQ96TA0 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC23.54■■□□□ 1.36
PCDHB18PQ96TA0 ECEL1P1-201ENST00000373592 1742 ntBASIC23.54■■□□□ 1.36
PCDHB18PQ96TA0 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC23.54■■□□□ 1.36
PCDHB18PQ96TA0 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHB18PQ96TA0 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHB18PQ96TA0 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHB18PQ96TA0 AC127496.7-201ENST00000625110 1798 ntBASIC23.54■■□□□ 1.36
PCDHB18PQ96TA0 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.54■■□□□ 1.36
PCDHB18PQ96TA0 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHB18PQ96TA0 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC23.53■■□□□ 1.36
PCDHB18PQ96TA0 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHB18PQ96TA0 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC23.53■■□□□ 1.36
PCDHB18PQ96TA0 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHB18PQ96TA0 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHB18PQ96TA0 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHB18PQ96TA0 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHB18PQ96TA0 LINC00526-201ENST00000581067 1875 ntBASIC23.53■■□□□ 1.36
PCDHB18PQ96TA0 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC23.53■■□□□ 1.36
PCDHB18PQ96TA0 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHB18PQ96TA0 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC23.52■■□□□ 1.36
PCDHB18PQ96TA0 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHB18PQ96TA0 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC23.52■■□□□ 1.36
PCDHB18PQ96TA0 RASSF1-AS1-201ENST00000629828 790 ntBASIC23.52■■□□□ 1.36
PCDHB18PQ96TA0 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHB18PQ96TA0 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.35
PCDHB18PQ96TA0 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.35
PCDHB18PQ96TA0 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCDHB18PQ96TA0 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCDHB18PQ96TA0 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCDHB18PQ96TA0 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC23.51■■□□□ 1.35
PCDHB18PQ96TA0 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC23.51■■□□□ 1.35
PCDHB18PQ96TA0 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC23.51■■□□□ 1.35
PCDHB18PQ96TA0 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
PCDHB18PQ96TA0 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
PCDHB18PQ96TA0 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCDHB18PQ96TA0 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDHB18PQ96TA0 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.5■■□□□ 1.35
PCDHB18PQ96TA0 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC23.5■■□□□ 1.35
PCDHB18PQ96TA0 AK3-203ENST00000447596 705 ntTSL 2 BASIC23.5■■□□□ 1.35
PCDHB18PQ96TA0 GRAMD4P7-201ENST00000578182 1232 ntBASIC23.5■■□□□ 1.35
PCDHB18PQ96TA0 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDHB18PQ96TA0 AL117332.1-201ENST00000622628 974 ntBASIC23.5■■□□□ 1.35
PCDHB18PQ96TA0 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC23.5■■□□□ 1.35
PCDHB18PQ96TA0 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC23.5■■□□□ 1.35
PCDHB18PQ96TA0 AC080038.3-201ENST00000623346 1952 ntBASIC23.5■■□□□ 1.35
PCDHB18PQ96TA0 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDHB18PQ96TA0 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC23.5■■□□□ 1.35
PCDHB18PQ96TA0 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHB18PQ96TA0 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHB18PQ96TA0 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHB18PQ96TA0 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHB18PQ96TA0 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHB18PQ96TA0 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC23.49■■□□□ 1.35
PCDHB18PQ96TA0 AC009086.3-201ENST00000623486 1008 ntBASIC23.49■■□□□ 1.35
PCDHB18PQ96TA0 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
PCDHB18PQ96TA0 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC23.49■■□□□ 1.35
PCDHB18PQ96TA0 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHB18PQ96TA0 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC23.48■■□□□ 1.35
PCDHB18PQ96TA0 AC004687.1-201ENST00000579003 1625 ntBASIC23.48■■□□□ 1.35
PCDHB18PQ96TA0 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
PCDHB18PQ96TA0 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
PCDHB18PQ96TA0 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC23.48■■□□□ 1.35
PCDHB18PQ96TA0 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PCDHB18PQ96TA0 MIR3621-201ENST00000580529 85 ntBASIC23.48■■□□□ 1.35
PCDHB18PQ96TA0 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC23.48■■□□□ 1.35
PCDHB18PQ96TA0 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
PCDHB18PQ96TA0 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PCDHB18PQ96TA0 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
PCDHB18PQ96TA0 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC23.48■■□□□ 1.35
PCDHB18PQ96TA0 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PCDHB18PQ96TA0 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC23.47■■□□□ 1.35
PCDHB18PQ96TA0 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PCDHB18PQ96TA0 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
PCDHB18PQ96TA0 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PCDHB18PQ96TA0 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
PCDHB18PQ96TA0 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
PCDHB18PQ96TA0 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PCDHB18PQ96TA0 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
PCDHB18PQ96TA0 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PCDHB18PQ96TA0 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC23.47■■□□□ 1.35
PCDHB18PQ96TA0 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
PCDHB18PQ96TA0 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23.47■■□□□ 1.35
PCDHB18PQ96TA0 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
PCDHB18PQ96TA0 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PCDHB18PQ96TA0 AC242852.2-201ENST00000615738 1807 ntBASIC23.47■■□□□ 1.35
PCDHB18PQ96TA0 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms