Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
DUX3Q96PT4 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
DUX3Q96PT4 RHOF-204ENST00000537265 699 ntTSL 2 BASIC17.16■□□□□ 0.34
DUX3Q96PT4 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
DUX3Q96PT4 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
DUX3Q96PT4 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
DUX3Q96PT4 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
DUX3Q96PT4 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
DUX3Q96PT4 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
DUX3Q96PT4 LINC01529-204ENST00000636474 1715 ntBASIC17.16■□□□□ 0.34
DUX3Q96PT4 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
DUX3Q96PT4 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DUX3Q96PT4 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
DUX3Q96PT4 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC17.15■□□□□ 0.34
DUX3Q96PT4 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
DUX3Q96PT4 AC079630.1-202ENST00000618127 1840 ntBASIC17.15■□□□□ 0.34
DUX3Q96PT4 SNX3-202ENST00000349379 890 ntTSL 2 BASIC17.15■□□□□ 0.34
DUX3Q96PT4 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC17.15■□□□□ 0.34
DUX3Q96PT4 AC026271.2-201ENST00000428091 497 ntBASIC17.15■□□□□ 0.34
DUX3Q96PT4 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DUX3Q96PT4 AC010525.1-201ENST00000585559 441 ntBASIC17.15■□□□□ 0.34
DUX3Q96PT4 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC17.15■□□□□ 0.34
DUX3Q96PT4 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
DUX3Q96PT4 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DUX3Q96PT4 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC17.15■□□□□ 0.34
DUX3Q96PT4 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DUX3Q96PT4 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
DUX3Q96PT4 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
DUX3Q96PT4 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
DUX3Q96PT4 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
DUX3Q96PT4 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
DUX3Q96PT4 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC17.14■□□□□ 0.33
DUX3Q96PT4 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
DUX3Q96PT4 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC17.14■□□□□ 0.33
DUX3Q96PT4 TSPY26P-201ENST00000476365 1326 ntBASIC17.14■□□□□ 0.33
DUX3Q96PT4 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
DUX3Q96PT4 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
DUX3Q96PT4 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
DUX3Q96PT4 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
DUX3Q96PT4 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
DUX3Q96PT4 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC17.13■□□□□ 0.33
DUX3Q96PT4 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC17.13■□□□□ 0.33
DUX3Q96PT4 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
DUX3Q96PT4 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
DUX3Q96PT4 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC17.13■□□□□ 0.33
DUX3Q96PT4 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
DUX3Q96PT4 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
DUX3Q96PT4 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
DUX3Q96PT4 IRS3P-201ENST00000223076 1006 ntBASIC17.13■□□□□ 0.33
DUX3Q96PT4 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
DUX3Q96PT4 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC17.13■□□□□ 0.33
DUX3Q96PT4 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC17.13■□□□□ 0.33
DUX3Q96PT4 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC17.13■□□□□ 0.33
DUX3Q96PT4 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
DUX3Q96PT4 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC17.13■□□□□ 0.33
DUX3Q96PT4 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
DUX3Q96PT4 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
DUX3Q96PT4 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
DUX3Q96PT4 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
DUX3Q96PT4 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
DUX3Q96PT4 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
DUX3Q96PT4 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC17.13■□□□□ 0.33
DUX3Q96PT4 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
DUX3Q96PT4 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
DUX3Q96PT4 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC17.12■□□□□ 0.33
DUX3Q96PT4 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
DUX3Q96PT4 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC17.12■□□□□ 0.33
DUX3Q96PT4 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC17.12■□□□□ 0.33
DUX3Q96PT4 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DUX3Q96PT4 H19-210ENST00000439725 1929 ntTSL 2 BASIC17.12■□□□□ 0.33
DUX3Q96PT4 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DUX3Q96PT4 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
DUX3Q96PT4 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
DUX3Q96PT4 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DUX3Q96PT4 DUX4L4-201ENST00000566884 1269 ntBASIC17.12■□□□□ 0.33
DUX3Q96PT4 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC17.12■□□□□ 0.33
DUX3Q96PT4 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
DUX3Q96PT4 FP325331.1-202ENST00000623531 1380 ntBASIC17.12■□□□□ 0.33
DUX3Q96PT4 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DUX3Q96PT4 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
DUX3Q96PT4 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC17.11■□□□□ 0.33
DUX3Q96PT4 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC17.11■□□□□ 0.33
DUX3Q96PT4 AC093323.1-202ENST00000635031 2045 ntBASIC17.11■□□□□ 0.33
DUX3Q96PT4 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
DUX3Q96PT4 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
DUX3Q96PT4 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DUX3Q96PT4 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DUX3Q96PT4 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DUX3Q96PT4 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC17.11■□□□□ 0.33
DUX3Q96PT4 AL499627.2-201ENST00000606283 725 ntBASIC17.11■□□□□ 0.33
DUX3Q96PT4 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC17.11■□□□□ 0.33
DUX3Q96PT4 MPST-208ENST00000628507 698 ntTSL 5 BASIC17.11■□□□□ 0.33
DUX3Q96PT4 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DUX3Q96PT4 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DUX3Q96PT4 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DUX3Q96PT4 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
DUX3Q96PT4 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
DUX3Q96PT4 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC17.1■□□□□ 0.33
DUX3Q96PT4 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
DUX3Q96PT4 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms