Protein–RNA interactions for Protein: Q8NCN4

RNF169, E3 ubiquitin-protein ligase RNF169, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF169Q8NCN4 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RNF169Q8NCN4 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC24.12■■□□□ 1.45
RNF169Q8NCN4 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RNF169Q8NCN4 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RNF169Q8NCN4 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC24.12■■□□□ 1.45
RNF169Q8NCN4 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC24.12■■□□□ 1.45
RNF169Q8NCN4 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC24.12■■□□□ 1.45
RNF169Q8NCN4 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RNF169Q8NCN4 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RNF169Q8NCN4 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
RNF169Q8NCN4 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC24.12■■□□□ 1.45
RNF169Q8NCN4 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
RNF169Q8NCN4 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC24.12■■□□□ 1.45
RNF169Q8NCN4 RAB43-208ENST00000615093 783 ntTSL 5 BASIC24.12■■□□□ 1.45
RNF169Q8NCN4 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC24.12■■□□□ 1.45
RNF169Q8NCN4 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC24.12■■□□□ 1.45
RNF169Q8NCN4 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
RNF169Q8NCN4 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RNF169Q8NCN4 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC24.11■■□□□ 1.45
RNF169Q8NCN4 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC24.11■■□□□ 1.45
RNF169Q8NCN4 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RNF169Q8NCN4 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RNF169Q8NCN4 ABCB10P4-201ENST00000566803 2184 ntBASIC24.11■■□□□ 1.45
RNF169Q8NCN4 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RNF169Q8NCN4 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
RNF169Q8NCN4 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
RNF169Q8NCN4 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
RNF169Q8NCN4 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
RNF169Q8NCN4 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RNF169Q8NCN4 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC24.11■■□□□ 1.45
RNF169Q8NCN4 PREB-202ENST00000406567 1910 ntTSL 5 BASIC24.11■■□□□ 1.45
RNF169Q8NCN4 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
RNF169Q8NCN4 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
RNF169Q8NCN4 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
RNF169Q8NCN4 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
RNF169Q8NCN4 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC24.1■■□□□ 1.45
RNF169Q8NCN4 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
RNF169Q8NCN4 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
RNF169Q8NCN4 AC027612.3-201ENST00000413684 1047 ntBASIC24.1■■□□□ 1.45
RNF169Q8NCN4 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC24.1■■□□□ 1.45
RNF169Q8NCN4 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
RNF169Q8NCN4 AL354811.1-201ENST00000610286 706 ntBASIC24.1■■□□□ 1.45
RNF169Q8NCN4 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
RNF169Q8NCN4 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
RNF169Q8NCN4 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
RNF169Q8NCN4 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RNF169Q8NCN4 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RNF169Q8NCN4 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC24.09■■□□□ 1.45
RNF169Q8NCN4 KRT18P5-201ENST00000436075 1291 ntBASIC24.09■■□□□ 1.45
RNF169Q8NCN4 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC24.09■■□□□ 1.45
RNF169Q8NCN4 DUX4L2-201ENST00000561772 1275 ntBASIC24.09■■□□□ 1.45
RNF169Q8NCN4 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC24.09■■□□□ 1.45
RNF169Q8NCN4 DUX4L6-201ENST00000626483 1275 ntBASIC24.09■■□□□ 1.45
RNF169Q8NCN4 DUX4L1-201ENST00000627662 1275 ntBASIC24.09■■□□□ 1.45
RNF169Q8NCN4 DUX4L8-201ENST00000629013 1275 ntBASIC24.09■■□□□ 1.45
RNF169Q8NCN4 DUX4L3-201ENST00000630187 1275 ntBASIC24.09■■□□□ 1.45
RNF169Q8NCN4 DUX4L7-201ENST00000630678 1275 ntBASIC24.09■■□□□ 1.45
RNF169Q8NCN4 DUX4L5-201ENST00000630834 1275 ntBASIC24.09■■□□□ 1.45
RNF169Q8NCN4 AC079630.1-202ENST00000618127 1840 ntBASIC24.09■■□□□ 1.45
RNF169Q8NCN4 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
RNF169Q8NCN4 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RNF169Q8NCN4 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC24.09■■□□□ 1.45
RNF169Q8NCN4 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
RNF169Q8NCN4 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC24.08■■□□□ 1.45
RNF169Q8NCN4 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
RNF169Q8NCN4 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC24.08■■□□□ 1.45
RNF169Q8NCN4 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC24.08■■□□□ 1.45
RNF169Q8NCN4 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC24.08■■□□□ 1.45
RNF169Q8NCN4 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.45
RNF169Q8NCN4 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
RNF169Q8NCN4 IKBKGP1-201ENST00000612193 1073 ntBASIC24.08■■□□□ 1.45
RNF169Q8NCN4 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
RNF169Q8NCN4 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
RNF169Q8NCN4 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
RNF169Q8NCN4 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC24.07■■□□□ 1.44
RNF169Q8NCN4 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
RNF169Q8NCN4 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
RNF169Q8NCN4 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC24.07■■□□□ 1.44
RNF169Q8NCN4 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC24.07■■□□□ 1.44
RNF169Q8NCN4 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
RNF169Q8NCN4 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
RNF169Q8NCN4 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
RNF169Q8NCN4 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
RNF169Q8NCN4 STX4-202ENST00000394998 1498 ntTSL 2 BASIC24.07■■□□□ 1.44
RNF169Q8NCN4 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC24.06■■□□□ 1.44
RNF169Q8NCN4 LHPP-203ENST00000392757 840 ntTSL 3 BASIC24.06■■□□□ 1.44
RNF169Q8NCN4 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
RNF169Q8NCN4 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC24.06■■□□□ 1.44
RNF169Q8NCN4 AC022517.1-201ENST00000592429 346 ntBASIC24.06■■□□□ 1.44
RNF169Q8NCN4 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
RNF169Q8NCN4 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC24.06■■□□□ 1.44
RNF169Q8NCN4 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
RNF169Q8NCN4 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC24.06■■□□□ 1.44
RNF169Q8NCN4 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC24.06■■□□□ 1.44
RNF169Q8NCN4 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC24.05■■□□□ 1.44
RNF169Q8NCN4 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC24.05■■□□□ 1.44
RNF169Q8NCN4 AC123595.1-201ENST00000440769 1046 ntBASIC24.05■■□□□ 1.44
RNF169Q8NCN4 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
RNF169Q8NCN4 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC24.05■■□□□ 1.44
RNF169Q8NCN4 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC24.05■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms