Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 PKD1P6-201ENST00000343738 4769 ntBASIC14.84□□□□□ -0.03
LINC01561Q8N1V8 WWC2-AS2-201ENST00000578387 2183 ntBASIC14.84□□□□□ -0.03
LINC01561Q8N1V8 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC01561Q8N1V8 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC01561Q8N1V8 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC01561Q8N1V8 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC14.84□□□□□ -0.03
LINC01561Q8N1V8 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC14.84□□□□□ -0.03
LINC01561Q8N1V8 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC14.84□□□□□ -0.03
LINC01561Q8N1V8 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC01561Q8N1V8 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC01561Q8N1V8 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC14.84□□□□□ -0.03
LINC01561Q8N1V8 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC01561Q8N1V8 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC01561Q8N1V8 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC14.84□□□□□ -0.03
LINC01561Q8N1V8 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC14.84□□□□□ -0.03
LINC01561Q8N1V8 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC14.83□□□□□ -0.03
LINC01561Q8N1V8 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
LINC01561Q8N1V8 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC14.83□□□□□ -0.03
LINC01561Q8N1V8 LINC01529-204ENST00000636474 1715 ntBASIC14.83□□□□□ -0.03
LINC01561Q8N1V8 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
LINC01561Q8N1V8 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
LINC01561Q8N1V8 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.03
LINC01561Q8N1V8 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC14.83□□□□□ -0.04
LINC01561Q8N1V8 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC01561Q8N1V8 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
LINC01561Q8N1V8 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LINC01561Q8N1V8 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC14.83□□□□□ -0.04
LINC01561Q8N1V8 HSD17B1P1-201ENST00000590052 955 ntBASIC14.83□□□□□ -0.04
LINC01561Q8N1V8 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC14.83□□□□□ -0.04
LINC01561Q8N1V8 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC14.83□□□□□ -0.04
LINC01561Q8N1V8 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC01561Q8N1V8 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC01561Q8N1V8 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC01561Q8N1V8 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC14.83□□□□□ -0.04
LINC01561Q8N1V8 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC01561Q8N1V8 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC01561Q8N1V8 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
LINC01561Q8N1V8 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC01561Q8N1V8 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC01561Q8N1V8 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC01561Q8N1V8 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LINC01561Q8N1V8 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC01561Q8N1V8 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
LINC01561Q8N1V8 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC01561Q8N1V8 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC01561Q8N1V8 DUX4L18-201ENST00000553347 1267 ntBASIC14.82□□□□□ -0.04
LINC01561Q8N1V8 NTF6A-201ENST00000591175 560 ntBASIC14.82□□□□□ -0.04
LINC01561Q8N1V8 SNX5-217ENST00000606557 1087 ntBASIC14.82□□□□□ -0.04
LINC01561Q8N1V8 AC009086.3-201ENST00000623486 1008 ntBASIC14.82□□□□□ -0.04
LINC01561Q8N1V8 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC01561Q8N1V8 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC14.82□□□□□ -0.04
LINC01561Q8N1V8 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC01561Q8N1V8 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
LINC01561Q8N1V8 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC01561Q8N1V8 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
LINC01561Q8N1V8 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC01561Q8N1V8 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
LINC01561Q8N1V8 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LINC01561Q8N1V8 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC01561Q8N1V8 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC01561Q8N1V8 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC01561Q8N1V8 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC01561Q8N1V8 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LINC01561Q8N1V8 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LINC01561Q8N1V8 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC01561Q8N1V8 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC01561Q8N1V8 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC14.81□□□□□ -0.04
LINC01561Q8N1V8 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
LINC01561Q8N1V8 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC01561Q8N1V8 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC14.81□□□□□ -0.04
LINC01561Q8N1V8 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC14.81□□□□□ -0.04
LINC01561Q8N1V8 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LINC01561Q8N1V8 ABHD17AP5-201ENST00000580133 923 ntBASIC14.81□□□□□ -0.04
LINC01561Q8N1V8 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC14.81□□□□□ -0.04
LINC01561Q8N1V8 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC14.81□□□□□ -0.04
LINC01561Q8N1V8 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LINC01561Q8N1V8 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC01561Q8N1V8 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
LINC01561Q8N1V8 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC01561Q8N1V8 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
LINC01561Q8N1V8 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC01561Q8N1V8 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC01561Q8N1V8 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC14.8□□□□□ -0.04
LINC01561Q8N1V8 AL121603.2-201ENST00000557373 2117 ntBASIC14.8□□□□□ -0.04
LINC01561Q8N1V8 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC01561Q8N1V8 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC01561Q8N1V8 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC14.8□□□□□ -0.04
LINC01561Q8N1V8 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC14.8□□□□□ -0.04
LINC01561Q8N1V8 MIR4508-201ENST00000584178 70 ntBASIC14.8□□□□□ -0.04
LINC01561Q8N1V8 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LINC01561Q8N1V8 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC01561Q8N1V8 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
LINC01561Q8N1V8 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC14.8□□□□□ -0.04
LINC01561Q8N1V8 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC01561Q8N1V8 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC14.8□□□□□ -0.04
LINC01561Q8N1V8 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LINC01561Q8N1V8 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
LINC01561Q8N1V8 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC14.8□□□□□ -0.04
LINC01561Q8N1V8 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC01561Q8N1V8 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms