Protein–RNA interactions for Protein: Q8IWA5

SLC44A2, Choline transporter-like protein 2, humanhuman

Predicted RBP Predictions only

Length 706 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A2Q8IWA5 MIR6724-2-201ENST00000616483 92 ntBASIC20.97■□□□□ 0.95
SLC44A2Q8IWA5 MIR6724-4-201ENST00000617390 92 ntBASIC20.97■□□□□ 0.95
SLC44A2Q8IWA5 MIR6724-3-201ENST00000622482 92 ntBASIC20.97■□□□□ 0.95
SLC44A2Q8IWA5 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
SLC44A2Q8IWA5 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
SLC44A2Q8IWA5 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC44A2Q8IWA5 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.97■□□□□ 0.95
SLC44A2Q8IWA5 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
SLC44A2Q8IWA5 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SLC44A2Q8IWA5 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SLC44A2Q8IWA5 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
SLC44A2Q8IWA5 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SLC44A2Q8IWA5 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.96■□□□□ 0.95
SLC44A2Q8IWA5 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.96■□□□□ 0.95
SLC44A2Q8IWA5 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.96■□□□□ 0.95
SLC44A2Q8IWA5 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.96■□□□□ 0.95
SLC44A2Q8IWA5 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SLC44A2Q8IWA5 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.96■□□□□ 0.95
SLC44A2Q8IWA5 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
SLC44A2Q8IWA5 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
SLC44A2Q8IWA5 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC44A2Q8IWA5 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SLC44A2Q8IWA5 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
SLC44A2Q8IWA5 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.95■□□□□ 0.94
SLC44A2Q8IWA5 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.95■□□□□ 0.94
SLC44A2Q8IWA5 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
SLC44A2Q8IWA5 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.95■□□□□ 0.94
SLC44A2Q8IWA5 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.95■□□□□ 0.94
SLC44A2Q8IWA5 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
SLC44A2Q8IWA5 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC44A2Q8IWA5 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC44A2Q8IWA5 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC44A2Q8IWA5 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
SLC44A2Q8IWA5 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC44A2Q8IWA5 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.95■□□□□ 0.94
SLC44A2Q8IWA5 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC44A2Q8IWA5 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SLC44A2Q8IWA5 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC44A2Q8IWA5 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC44A2Q8IWA5 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.94■□□□□ 0.94
SLC44A2Q8IWA5 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC44A2Q8IWA5 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC44A2Q8IWA5 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
SLC44A2Q8IWA5 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SLC44A2Q8IWA5 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC44A2Q8IWA5 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SLC44A2Q8IWA5 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SLC44A2Q8IWA5 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SLC44A2Q8IWA5 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SLC44A2Q8IWA5 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SLC44A2Q8IWA5 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SLC44A2Q8IWA5 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.93■□□□□ 0.94
SLC44A2Q8IWA5 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.93■□□□□ 0.94
SLC44A2Q8IWA5 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.93■□□□□ 0.94
SLC44A2Q8IWA5 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SLC44A2Q8IWA5 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SLC44A2Q8IWA5 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC44A2Q8IWA5 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
SLC44A2Q8IWA5 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
SLC44A2Q8IWA5 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.92■□□□□ 0.94
SLC44A2Q8IWA5 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.92■□□□□ 0.94
SLC44A2Q8IWA5 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC44A2Q8IWA5 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC44A2Q8IWA5 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC44A2Q8IWA5 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC44A2Q8IWA5 AL356441.2-201ENST00000443009 864 ntBASIC20.92■□□□□ 0.94
SLC44A2Q8IWA5 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.92■□□□□ 0.94
SLC44A2Q8IWA5 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC44A2Q8IWA5 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SLC44A2Q8IWA5 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.92■□□□□ 0.94
SLC44A2Q8IWA5 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SLC44A2Q8IWA5 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SLC44A2Q8IWA5 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.91■□□□□ 0.94
SLC44A2Q8IWA5 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SLC44A2Q8IWA5 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SLC44A2Q8IWA5 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.91■□□□□ 0.94
SLC44A2Q8IWA5 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SLC44A2Q8IWA5 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC44A2Q8IWA5 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
SLC44A2Q8IWA5 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SLC44A2Q8IWA5 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC44A2Q8IWA5 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SLC44A2Q8IWA5 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.9■□□□□ 0.94
SLC44A2Q8IWA5 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC44A2Q8IWA5 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SLC44A2Q8IWA5 AL353803.4-201ENST00000565882 1934 ntBASIC20.9■□□□□ 0.94
SLC44A2Q8IWA5 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC44A2Q8IWA5 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
SLC44A2Q8IWA5 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SLC44A2Q8IWA5 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SLC44A2Q8IWA5 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.89■□□□□ 0.93
SLC44A2Q8IWA5 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.89■□□□□ 0.93
SLC44A2Q8IWA5 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SLC44A2Q8IWA5 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SLC44A2Q8IWA5 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SLC44A2Q8IWA5 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.88■□□□□ 0.93
SLC44A2Q8IWA5 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC44A2Q8IWA5 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC44A2Q8IWA5 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.88■□□□□ 0.93
SLC44A2Q8IWA5 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms