Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
RNF135Q8IUD6 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
RNF135Q8IUD6 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
RNF135Q8IUD6 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
RNF135Q8IUD6 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
RNF135Q8IUD6 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.44■■□□□ 1.34
RNF135Q8IUD6 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC23.44■■□□□ 1.34
RNF135Q8IUD6 AL355802.2-201ENST00000402069 882 ntBASIC23.44■■□□□ 1.34
RNF135Q8IUD6 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC23.44■■□□□ 1.34
RNF135Q8IUD6 MAP2K4P1-201ENST00000438453 1195 ntBASIC23.44■■□□□ 1.34
RNF135Q8IUD6 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC23.44■■□□□ 1.34
RNF135Q8IUD6 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC23.44■■□□□ 1.34
RNF135Q8IUD6 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC23.44■■□□□ 1.34
RNF135Q8IUD6 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC23.44■■□□□ 1.34
RNF135Q8IUD6 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
RNF135Q8IUD6 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.44■■□□□ 1.34
RNF135Q8IUD6 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
RNF135Q8IUD6 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC23.43■■□□□ 1.34
RNF135Q8IUD6 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC23.43■■□□□ 1.34
RNF135Q8IUD6 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC23.43■■□□□ 1.34
RNF135Q8IUD6 AC016769.1-201ENST00000409132 1010 ntBASIC23.43■■□□□ 1.34
RNF135Q8IUD6 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC23.43■■□□□ 1.34
RNF135Q8IUD6 AC026185.1-201ENST00000445748 174 ntBASIC23.43■■□□□ 1.34
RNF135Q8IUD6 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC23.43■■□□□ 1.34
RNF135Q8IUD6 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
RNF135Q8IUD6 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC23.42■■□□□ 1.34
RNF135Q8IUD6 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
RNF135Q8IUD6 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
RNF135Q8IUD6 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC23.42■■□□□ 1.34
RNF135Q8IUD6 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
RNF135Q8IUD6 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
RNF135Q8IUD6 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
RNF135Q8IUD6 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC23.42■■□□□ 1.34
RNF135Q8IUD6 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC23.42■■□□□ 1.34
RNF135Q8IUD6 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
RNF135Q8IUD6 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC23.42■■□□□ 1.34
RNF135Q8IUD6 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC23.42■■□□□ 1.34
RNF135Q8IUD6 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
RNF135Q8IUD6 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
RNF135Q8IUD6 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
RNF135Q8IUD6 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
RNF135Q8IUD6 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
RNF135Q8IUD6 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
RNF135Q8IUD6 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RNF135Q8IUD6 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
RNF135Q8IUD6 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RNF135Q8IUD6 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.41■■□□□ 1.34
RNF135Q8IUD6 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RNF135Q8IUD6 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RNF135Q8IUD6 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RNF135Q8IUD6 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC23.4■■□□□ 1.34
RNF135Q8IUD6 LINC01124-201ENST00000409786 2117 ntBASIC23.4■■□□□ 1.34
RNF135Q8IUD6 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC23.4■■□□□ 1.34
RNF135Q8IUD6 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC23.4■■□□□ 1.34
RNF135Q8IUD6 AC137761.2-201ENST00000561729 223 ntBASIC23.4■■□□□ 1.34
RNF135Q8IUD6 AC145350.3-201ENST00000569033 163 ntBASIC23.4■■□□□ 1.34
RNF135Q8IUD6 AL109923.1-201ENST00000618799 583 ntBASIC23.4■■□□□ 1.34
RNF135Q8IUD6 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
RNF135Q8IUD6 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
RNF135Q8IUD6 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RNF135Q8IUD6 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RNF135Q8IUD6 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
RNF135Q8IUD6 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RNF135Q8IUD6 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RNF135Q8IUD6 GAS2L1P2-201ENST00000436355 1356 ntBASIC23.4■■□□□ 1.34
RNF135Q8IUD6 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
RNF135Q8IUD6 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.39■■□□□ 1.34
RNF135Q8IUD6 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC23.39■■□□□ 1.34
RNF135Q8IUD6 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC23.39■■□□□ 1.33
RNF135Q8IUD6 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
RNF135Q8IUD6 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC23.39■■□□□ 1.33
RNF135Q8IUD6 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC23.39■■□□□ 1.33
RNF135Q8IUD6 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
RNF135Q8IUD6 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RNF135Q8IUD6 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RNF135Q8IUD6 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RNF135Q8IUD6 NT5C3AP1-201ENST00000394500 1012 ntBASIC23.38■■□□□ 1.33
RNF135Q8IUD6 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
RNF135Q8IUD6 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC23.38■■□□□ 1.33
RNF135Q8IUD6 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC23.38■■□□□ 1.33
RNF135Q8IUD6 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC23.38■■□□□ 1.33
RNF135Q8IUD6 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.38■■□□□ 1.33
RNF135Q8IUD6 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RNF135Q8IUD6 AL022069.1-201ENST00000568025 1636 ntBASIC23.37■■□□□ 1.33
RNF135Q8IUD6 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RNF135Q8IUD6 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
RNF135Q8IUD6 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC23.37■■□□□ 1.33
RNF135Q8IUD6 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
RNF135Q8IUD6 AC006970.2-201ENST00000450065 779 ntBASIC23.37■■□□□ 1.33
RNF135Q8IUD6 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RNF135Q8IUD6 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
RNF135Q8IUD6 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC23.37■■□□□ 1.33
RNF135Q8IUD6 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
RNF135Q8IUD6 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
RNF135Q8IUD6 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC23.37■■□□□ 1.33
RNF135Q8IUD6 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC23.37■■□□□ 1.33
RNF135Q8IUD6 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
RNF135Q8IUD6 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23.37■■□□□ 1.33
RNF135Q8IUD6 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
RNF135Q8IUD6 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms