Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
VPS13CQ709C8 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
VPS13CQ709C8 AL138781.1-201ENST00000566567 1274 ntBASIC18.69■□□□□ 0.58
VPS13CQ709C8 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS13CQ709C8 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VPS13CQ709C8 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.69■□□□□ 0.58
VPS13CQ709C8 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.69■□□□□ 0.58
VPS13CQ709C8 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS13CQ709C8 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS13CQ709C8 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VPS13CQ709C8 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
VPS13CQ709C8 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.68■□□□□ 0.58
VPS13CQ709C8 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
VPS13CQ709C8 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC18.68■□□□□ 0.58
VPS13CQ709C8 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.68■□□□□ 0.58
VPS13CQ709C8 AL050303.2-201ENST00000619798 666 ntBASIC18.68■□□□□ 0.58
VPS13CQ709C8 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VPS13CQ709C8 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
VPS13CQ709C8 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
VPS13CQ709C8 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
VPS13CQ709C8 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VPS13CQ709C8 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VPS13CQ709C8 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
VPS13CQ709C8 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
VPS13CQ709C8 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
VPS13CQ709C8 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VPS13CQ709C8 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VPS13CQ709C8 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VPS13CQ709C8 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
VPS13CQ709C8 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
VPS13CQ709C8 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VPS13CQ709C8 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.67■□□□□ 0.58
VPS13CQ709C8 MIR6089-201ENST00000616698 64 ntBASIC18.67■□□□□ 0.58
VPS13CQ709C8 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.67■□□□□ 0.58
VPS13CQ709C8 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VPS13CQ709C8 SLC7A5P2-201ENST00000553010 536 ntBASIC18.67■□□□□ 0.58
VPS13CQ709C8 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
VPS13CQ709C8 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
VPS13CQ709C8 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC18.67■□□□□ 0.58
VPS13CQ709C8 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VPS13CQ709C8 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
VPS13CQ709C8 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
VPS13CQ709C8 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC18.66■□□□□ 0.58
VPS13CQ709C8 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
VPS13CQ709C8 AC011767.1-201ENST00000617410 1153 ntBASIC18.66■□□□□ 0.58
VPS13CQ709C8 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.66■□□□□ 0.58
VPS13CQ709C8 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.66■□□□□ 0.58
VPS13CQ709C8 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.66■□□□□ 0.58
VPS13CQ709C8 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.66■□□□□ 0.58
VPS13CQ709C8 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC18.66■□□□□ 0.58
VPS13CQ709C8 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
VPS13CQ709C8 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
VPS13CQ709C8 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VPS13CQ709C8 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC18.65■□□□□ 0.58
VPS13CQ709C8 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VPS13CQ709C8 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VPS13CQ709C8 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
VPS13CQ709C8 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
VPS13CQ709C8 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VPS13CQ709C8 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VPS13CQ709C8 AC098934.4-201ENST00000564127 592 ntBASIC18.65■□□□□ 0.58
VPS13CQ709C8 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.64■□□□□ 0.58
VPS13CQ709C8 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
VPS13CQ709C8 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VPS13CQ709C8 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
VPS13CQ709C8 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VPS13CQ709C8 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VPS13CQ709C8 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
VPS13CQ709C8 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VPS13CQ709C8 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VPS13CQ709C8 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VPS13CQ709C8 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.63■□□□□ 0.57
VPS13CQ709C8 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.63■□□□□ 0.57
VPS13CQ709C8 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.63■□□□□ 0.57
VPS13CQ709C8 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.63■□□□□ 0.57
VPS13CQ709C8 AC008687.6-201ENST00000596318 630 ntBASIC18.63■□□□□ 0.57
VPS13CQ709C8 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VPS13CQ709C8 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VPS13CQ709C8 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VPS13CQ709C8 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
VPS13CQ709C8 BID-214ENST00000617586 542 ntTSL 5 BASIC18.63■□□□□ 0.57
VPS13CQ709C8 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VPS13CQ709C8 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
VPS13CQ709C8 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VPS13CQ709C8 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VPS13CQ709C8 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VPS13CQ709C8 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VPS13CQ709C8 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VPS13CQ709C8 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VPS13CQ709C8 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VPS13CQ709C8 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.62■□□□□ 0.57
VPS13CQ709C8 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.62■□□□□ 0.57
VPS13CQ709C8 TMEM191A-211ENST00000637163 1067 ntBASIC18.62■□□□□ 0.57
VPS13CQ709C8 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
VPS13CQ709C8 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.62■□□□□ 0.57
VPS13CQ709C8 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.62■□□□□ 0.57
VPS13CQ709C8 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VPS13CQ709C8 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VPS13CQ709C8 AP004607.4-201ENST00000530158 1459 ntBASIC18.62■□□□□ 0.57
VPS13CQ709C8 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms