Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
NIPAL3Q6P499 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.13■□□□□ 0.81
NIPAL3Q6P499 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.13■□□□□ 0.81
NIPAL3Q6P499 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
NIPAL3Q6P499 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NIPAL3Q6P499 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NIPAL3Q6P499 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.12■□□□□ 0.81
NIPAL3Q6P499 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
NIPAL3Q6P499 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NIPAL3Q6P499 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NIPAL3Q6P499 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.12■□□□□ 0.81
NIPAL3Q6P499 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NIPAL3Q6P499 AC242852.2-201ENST00000615738 1807 ntBASIC20.12■□□□□ 0.81
NIPAL3Q6P499 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NIPAL3Q6P499 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.12■□□□□ 0.81
NIPAL3Q6P499 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.12■□□□□ 0.81
NIPAL3Q6P499 AL356441.2-201ENST00000443009 864 ntBASIC20.12■□□□□ 0.81
NIPAL3Q6P499 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NIPAL3Q6P499 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
NIPAL3Q6P499 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NIPAL3Q6P499 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NIPAL3Q6P499 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
NIPAL3Q6P499 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NIPAL3Q6P499 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NIPAL3Q6P499 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NIPAL3Q6P499 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NIPAL3Q6P499 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.11■□□□□ 0.81
NIPAL3Q6P499 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.11■□□□□ 0.81
NIPAL3Q6P499 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
NIPAL3Q6P499 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NIPAL3Q6P499 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NIPAL3Q6P499 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
NIPAL3Q6P499 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
NIPAL3Q6P499 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NIPAL3Q6P499 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NIPAL3Q6P499 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NIPAL3Q6P499 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NIPAL3Q6P499 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NIPAL3Q6P499 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
NIPAL3Q6P499 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.1■□□□□ 0.81
NIPAL3Q6P499 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NIPAL3Q6P499 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.09■□□□□ 0.81
NIPAL3Q6P499 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.09■□□□□ 0.81
NIPAL3Q6P499 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.09■□□□□ 0.81
NIPAL3Q6P499 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.09■□□□□ 0.81
NIPAL3Q6P499 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NIPAL3Q6P499 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
NIPAL3Q6P499 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NIPAL3Q6P499 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.09■□□□□ 0.81
NIPAL3Q6P499 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
NIPAL3Q6P499 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.09■□□□□ 0.81
NIPAL3Q6P499 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
NIPAL3Q6P499 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
NIPAL3Q6P499 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
NIPAL3Q6P499 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
NIPAL3Q6P499 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.08■□□□□ 0.81
NIPAL3Q6P499 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.08■□□□□ 0.81
NIPAL3Q6P499 AC137767.1-201ENST00000602918 1920 ntBASIC20.08■□□□□ 0.81
NIPAL3Q6P499 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.08■□□□□ 0.81
NIPAL3Q6P499 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NIPAL3Q6P499 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NIPAL3Q6P499 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NIPAL3Q6P499 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
NIPAL3Q6P499 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.08■□□□□ 0.8
NIPAL3Q6P499 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NIPAL3Q6P499 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
NIPAL3Q6P499 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.07■□□□□ 0.8
NIPAL3Q6P499 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
NIPAL3Q6P499 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NIPAL3Q6P499 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
NIPAL3Q6P499 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
NIPAL3Q6P499 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NIPAL3Q6P499 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NIPAL3Q6P499 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NIPAL3Q6P499 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
NIPAL3Q6P499 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NIPAL3Q6P499 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
NIPAL3Q6P499 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.07■□□□□ 0.8
NIPAL3Q6P499 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.07■□□□□ 0.8
NIPAL3Q6P499 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.07■□□□□ 0.8
NIPAL3Q6P499 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.07■□□□□ 0.8
NIPAL3Q6P499 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NIPAL3Q6P499 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NIPAL3Q6P499 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NIPAL3Q6P499 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NIPAL3Q6P499 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
NIPAL3Q6P499 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NIPAL3Q6P499 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.07■□□□□ 0.8
NIPAL3Q6P499 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
NIPAL3Q6P499 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NIPAL3Q6P499 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
NIPAL3Q6P499 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NIPAL3Q6P499 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NIPAL3Q6P499 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NIPAL3Q6P499 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NIPAL3Q6P499 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
NIPAL3Q6P499 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.06■□□□□ 0.8
NIPAL3Q6P499 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NIPAL3Q6P499 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.05■□□□□ 0.8
NIPAL3Q6P499 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms